Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0785
         (500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   1.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.6  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   4.7  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   4.7  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   6.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.2  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +2

Query: 182 WQSS*CHICIQSTCSLVC 235
           W    CHIC   T  LVC
Sbjct: 109 WLHQICHICELHTIFLVC 126


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 188  SARPPWEPNYLAPYY 144
            S +PP EPN +  YY
Sbjct: 1220 SWKPPVEPNGIVEYY 1234


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 366 RNESQLSDPLASPTHLATLSPRP 434
           + E+  + PL +P H    SP P
Sbjct: 9   KQEADSTSPLLTPPHNPAYSPPP 31


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 118 LLPTPSVDVGGNSGTVSLSHSSDPLSVTSFS 26
           LLPTP+     +S T S S  S   + +S++
Sbjct: 190 LLPTPTCSEASSSPTPSHSSESSFSAASSYT 220


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +3

Query: 267 SLSPFLEDYKLHFNKKKRGPYKEAVKQATLEAKRNESQLSDPLASPTH 410
           +L+P +   +L  N     PY+   +  T  + R+    SD   SP H
Sbjct: 197 NLNPPVTQTQLPLNLGLDFPYQGKFEVPTKSSPRSSPVQSDVSLSPVH 244


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +3

Query: 156 KVIGFPWWP 182
           KV  F WWP
Sbjct: 45  KVFKFAWWP 53


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +3

Query: 156 KVIGFPWWP 182
           KV  F WWP
Sbjct: 45  KVFKFAWWP 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,879
Number of Sequences: 336
Number of extensions: 2779
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)