Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0785
(500 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718 46 2e-05
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 46 2e-05
11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717 45 3e-05
05_01_0169 - 1170614-1172098 45 3e-05
05_05_0133 + 22614219-22614651,22614767-22615671,22615918-226162... 45 4e-05
07_03_1788 + 29523216-29524867,29525048-29525075 43 2e-04
02_05_0419 - 28814754-28816114,28816749-28817435,28817554-288177... 33 0.17
02_02_0133 + 7077855-7078010,7078100-7078834 33 0.17
03_05_0431 + 24221881-24224586 32 0.23
01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962 32 0.23
04_04_1032 - 30259180-30260519,30260650-30260720,30261099-302621... 32 0.30
12_02_1261 + 27410921-27413401 31 0.52
09_01_0178 - 2548611-2548670,2549816-2549918,2549993-2550096,255... 31 0.52
10_08_1041 + 22512528-22512539,22512603-22512793,22512870-225130... 30 0.91
08_02_1053 - 23968372-23968442,23969245-23969294,23970396-239704... 30 1.2
02_01_0777 - 5785295-5787370,5787723-5788769 29 2.1
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 28 3.7
09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539 28 4.8
08_02_0630 - 19483485-19483671,19483761-19484179,19485180-194854... 27 6.4
05_01_0427 + 3374193-3374535,3374632-3374769,3375077-3375201,337... 27 6.4
04_03_0708 + 18888085-18889337,18889583-18889661,18890458-18890781 27 6.4
12_01_0944 - 9332033-9332314,9332560-9332872,9333827-9334035 27 8.5
10_07_0014 + 11800251-11800643,11800721-11801288,11801694-118017... 27 8.5
04_03_0437 + 15920806-15920811,15921257-15921429,15921515-159215... 27 8.5
02_04_0522 - 23654012-23654611,23654761-23655081 27 8.5
01_05_0408 + 21888898-21890181,21891289-21891984,21892167-21893705 27 8.5
>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
Length = 1412
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Frame = +3
Query: 123 FRISPGDIVWGKVIGFPWWPGRVLSVTSASR---------AH-VAWFASTTSSLMPCDSL 272
FR+S D+VWGKV PWWPG + + AS +H +A+F T + L
Sbjct: 248 FRVS--DLVWGKVKSHPWWPGEIFDPSDASELALKHQKKGSHLIAYFGDNTFAWCDESQL 305
Query: 273 SPFLEDYKLHFNKKKRGPYKEAVKQATLEAKR 368
PF+ +Y + + +V A E R
Sbjct: 306 KPFVSNYSQMEKQSSSDAFVSSVNYALEELSR 337
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Frame = +3
Query: 138 GDIVWGKVIGFPWWPGRVLSVTSASRAH-----------VAWFASTTSSLMPCDSLSPFL 284
GD+VWGKV PWWPG V S+T S VA+F ++ L PF
Sbjct: 47 GDMVWGKVKSHPWWPGHVYSITLTSDGEVRRGYRDGLVLVAFFGDSSYGWFEPHELLPFE 106
Query: 285 EDYKLHFNKKKRGPYKEAVKQATLEAKR 368
E ++ F + + A+ +A E R
Sbjct: 107 EHFREKFAQPGGRNFPTAIDEAADEVAR 134
>11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717
Length = 1055
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Frame = +3
Query: 132 SPGDIVWGKVIGFPWWPGRVLSVTSASR---AH-------VAWFASTTSSLMPCDSLSPF 281
+P ++VWGKV PWWPG+V AS+ H VA+F T + SL PF
Sbjct: 115 APPELVWGKVRSHPWWPGQVFDAADASKLALKHTRAGAPLVAYFWDKTFAWSDASSLLPF 174
Query: 282 LEDYKLHFNKKKRGPYKEAVKQATLEAKR 368
++ ++ + AV A E R
Sbjct: 175 CSNFTRLASQSTMSGFVSAVDAALQEVGR 203
>05_01_0169 - 1170614-1172098
Length = 494
Score = 45.2 bits (102), Expect = 3e-05
Identities = 29/74 (39%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Frame = +3
Query: 102 EGVGSRLFRISPGDIVWGKVIGFPWWPGRVLSVTSAS-------RAH----VAWFASTTS 248
EG R +PG +VWGKV PWWPG+V AS R H VA+F T
Sbjct: 80 EGEVGRRGGFAPGRLVWGKVRCHPWWPGQVFDPADASEQALEERRKHGATLVAFFWDKTF 139
Query: 249 SLMPCDSLSPFLED 290
+ + D L PF D
Sbjct: 140 AWVDADELLPFRGD 153
>05_05_0133 +
22614219-22614651,22614767-22615671,22615918-22616224,
22616307-22616380
Length = 572
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Frame = +3
Query: 144 IVWGKVIGFPWWPGRVLSVTSASR----------AH-VAWFASTTSSLMPCDSLSPFLED 290
+VW K+ G PWWPG + + AS +H VA+F S T + L PF+ +
Sbjct: 170 LVWSKLKGHPWWPGEIFDTSDASELALKHQKKKGSHLVAYFGSNTFAWCDESQLKPFMSN 229
Query: 291 YKLHFNKKKRGPYKEAVKQATLEAKR 368
Y N+ + +V A E R
Sbjct: 230 YSQMANQSNSDAFISSVNLALEEISR 255
>07_03_1788 + 29523216-29524867,29525048-29525075
Length = 559
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 105 GVGSRLFRISPGDIVWGKVIGFPWWPGRVLSVT-SASRAHVAWFASTTSSLMPCDSLSPF 281
G G+ +PGD+VWGK + P WPG V+S + ++ V++F + L P+
Sbjct: 53 GAGAGACPFAPGDLVWGKKLSHPAWPGEVISAAPTGAQLLVSFFGDKALAWCDAAQLRPY 112
>02_05_0419 -
28814754-28816114,28816749-28817435,28817554-28817774,
28818536-28818750
Length = 827
Score = 32.7 bits (71), Expect = 0.17
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 132 SPGDIVWGKVIGFPWWPGRVL 194
SPG IVW + WWPGR+L
Sbjct: 23 SPGTIVWVRRRNGSWWPGRIL 43
>02_02_0133 + 7077855-7078010,7078100-7078834
Length = 296
Score = 32.7 bits (71), Expect = 0.17
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = -2
Query: 241 VDANQATCALDADVTLRTLPGH----HGNPI-TLPHTISPGEILNNLLPTPSVDVGG 86
VD N A A+DAD LR LP H HG P+ T P + G+++ ++ S GG
Sbjct: 123 VDTNPA--AVDADGRLRILPYHGLPGHGCPLATCPPNMCKGKVMERIIDELSCGCGG 177
>03_05_0431 + 24221881-24224586
Length = 901
Score = 32.3 bits (70), Expect = 0.23
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 244 VVDANQATCALDADVTLRTLPGHHGNPITLPHTISPG 134
+V + TC + A+ +L+ + H P+ LP +SPG
Sbjct: 293 IVAGDYFTCGVPAETSLKPMCWGHSGPLALPMAVSPG 329
>01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962
Length = 774
Score = 32.3 bits (70), Expect = 0.23
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +3
Query: 138 GDIVWGKVIGFPWWPGRVLSVTSASRAHVAWFASTTSSLMPCDSLSPFLEDYKLHFNKKK 317
G +VW + WWPG++LS V S+ + + ++ Y L +K+
Sbjct: 25 GALVWVRRRNGSWWPGQILSADELPENCVVPPRSSGTPIKLLGRPDGSIDWYNLEKSKRV 84
Query: 318 R----GPYKEAVKQATLEAKRNE 374
+ G Y+E +++A +A++++
Sbjct: 85 KPFRCGEYEECIEKAKAQARQHK 107
>04_04_1032 -
30259180-30260519,30260650-30260720,30261099-30262118,
30263886-30264121
Length = 888
Score = 31.9 bits (69), Expect = 0.30
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 132 SPGDIVWGKVIGFPWWPGRVL 194
SPG IVW + WWPGR+L
Sbjct: 30 SPGIIVWVRRRNGSWWPGRIL 50
>12_02_1261 + 27410921-27413401
Length = 826
Score = 31.1 bits (67), Expect = 0.52
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 129 ISPGDIVWGKVIGFPWWPGRVL 194
++ GD+VW K PWWP +L
Sbjct: 10 LAAGDLVWAKSKRRPWWPAHLL 31
>09_01_0178 -
2548611-2548670,2549816-2549918,2549993-2550096,
2550893-2550988,2551418-2551482,2551558-2551591,
2552469-2552540,2552567-2552644,2553416-2553477,
2554267-2554530,2555057-2555246,2555432-2555500,
2555613-2555669,2555746-2555846,2556029-2556146,
2556225-2556272,2556362-2556487,2556960-2557118,
2558119-2558216,2558324-2558416,2559741-2559937,
2560231-2560354,2561121-2561334,2561773-2561830,
2561955-2562433
Length = 1022
Score = 31.1 bits (67), Expect = 0.52
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +3
Query: 129 ISPGDIVWGKVIGFPWWPGRVL--SVTSASRA 218
+ PGD+VW K+ G WP V+ S A+RA
Sbjct: 239 LDPGDLVWAKLTGHAMWPAVVVDESNVPANRA 270
>10_08_1041 +
22512528-22512539,22512603-22512793,22512870-22513064,
22513661-22513779,22513923-22514099,22514257-22514360
Length = 265
Score = 30.3 bits (65), Expect = 0.91
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 242 SGCKPSYMCSGCRCDTKNSARPPWEPNYLAP 150
+G K YM GCR D N P W+P+ AP
Sbjct: 231 AGKKSLYMRLGCRGDWPNIEPPGWDPDSDAP 261
>08_02_1053 -
23968372-23968442,23969245-23969294,23970396-23970457,
23970527-23970709,23970737-23970901,23972235-23972408
Length = 234
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 225 AWFASTTSSLMPCDSLSPFLEDYKLHF--NKKKRGPY 329
AWFAS S MP S+S +L + H N KK Y
Sbjct: 44 AWFASPPSQAMPSSSISAWLNNSNDHIESNFKKNNKY 80
>02_01_0777 - 5785295-5787370,5787723-5788769
Length = 1040
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 237 STTSSLMPCDSLSPFLEDYKLHFNK 311
STT +LM C S+S F E +LHF+K
Sbjct: 556 STTQALMECKSISEF-EASRLHFSK 579
>08_01_0003 +
30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +3
Query: 90 PTSTEGVGSRLFRISP--GDIVWGKVIGFPWWPGRV 191
P G + + P GD+V KV G+P WP +V
Sbjct: 3 PAGRRGAKAHKWTTQPQLGDLVLAKVKGYPPWPAKV 38
>09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539
Length = 1908
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 171 PWWPGRVLSVTSASRAHVAWFASTTSSLMPCDSLSPFL 284
P W GR+ S RA W +T S + C + + F+
Sbjct: 1861 PMWEGRIEWSASPGRAPYGWPRATALSCLTCGTSNTFV 1898
>08_02_0630 -
19483485-19483671,19483761-19484179,19485180-19485413,
19485714-19485851
Length = 325
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 84 FPPTSTEGVGSRLFRISPGDIV 149
FP TST+G S + + PGD+V
Sbjct: 74 FPKTSTDGGSSVIVALLPGDVV 95
>05_01_0427 +
3374193-3374535,3374632-3374769,3375077-3375201,
3375776-3376045,3376125-3376255,3377005-3377212,
3377301-3377366,3377456-3377533,3378426-3378482
Length = 471
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +3
Query: 261 CDSLSPFLEDYKLHFNKKKRGPYKEAVKQATLEAKRNESQLSDPLASPTHLATLSPRP 434
C ++ P +EDY LH ++ G + V + LE E + + P S +P
Sbjct: 399 CGTMLPEIEDYLLHLGRRYLGEKRSMVLK--LEVHDIEGTCKETITLPLEFKVSSGKP 454
>04_03_0708 + 18888085-18889337,18889583-18889661,18890458-18890781
Length = 551
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = -2
Query: 184 PGHHGNPITLPHTISPGEILNNLLPTP---SVDVGGNSGTVSLSHSSDPLSVTSFSPH 20
PG+ G+ + +P+ + E+L LL S G S T + + D +V++ PH
Sbjct: 455 PGNGGSTLAMPNNLVIREVLTRLLVKSLLRSWRTGRPSSTATSRSTGDATAVSAHRPH 512
>12_01_0944 - 9332033-9332314,9332560-9332872,9333827-9334035
Length = 267
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 306 NKKKRGPYKEAVKQATLEAKRNESQLSD 389
N + GPYKEA+K L+AK E++L +
Sbjct: 234 NGGEDGPYKEAMKD-LLDAKEKEAKLKE 260
>10_07_0014 +
11800251-11800643,11800721-11801288,11801694-11801729,
11802908-11802911,11804142-11805108
Length = 655
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 306 NKKKRGPYKEAVKQATLEAKRNESQLSD 389
N + GPYKEA+K L+AK E++L +
Sbjct: 223 NGGEDGPYKEAMKD-LLDAKEKEAKLKE 249
>04_03_0437 +
15920806-15920811,15921257-15921429,15921515-15921559,
15923662-15923821,15924709-15925047
Length = 240
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 300 VAYNPLKRGSDYRMALMMM*WMQTKLHVLWM 208
VAY+PL RG YR+ W + + W+
Sbjct: 67 VAYSPLGRGFSYRVKSCYHMWSLVPVKIKWL 97
>02_04_0522 - 23654012-23654611,23654761-23655081
Length = 306
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 306 NKKKRGPYKEAVKQATLEAKRNESQLSD 389
N + GPYKEA+K L+AK E++L +
Sbjct: 199 NGGQDGPYKEAMKD-LLDAKEKEAKLKE 225
>01_05_0408 + 21888898-21890181,21891289-21891984,21892167-21893705
Length = 1172
Score = 27.1 bits (57), Expect = 8.5
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Frame = +3
Query: 12 REKCGENEVTESGSDEWESETVPEFPPTSTEG---VGSR-LFRISPGDIVWGKVIGFPW 176
R +CG + + + + TV FP TEG G R + + G IV G+ F +
Sbjct: 40 RRRCGALSIARASASAKDGVTVRRFPAAPTEGGRLAGVRKIMILGAGPIVIGQACEFDY 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,429,382
Number of Sequences: 37544
Number of extensions: 315063
Number of successful extensions: 927
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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