Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0785
         (500 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97193-6|AAV34803.1|  780|Caenorhabditis elegans Hypothetical pr...    52   3e-07
U97193-5|AAV34804.1|  783|Caenorhabditis elegans Hypothetical pr...    52   3e-07
U80815-10|AAO91678.1|  437|Caenorhabditis elegans Hypothetical p...    34   0.067
U80815-9|AAV34785.1|  361|Caenorhabditis elegans Hypothetical pr...    34   0.067
U80815-8|AAB37997.1|  498|Caenorhabditis elegans Hypothetical pr...    34   0.067
U80815-7|AAO91677.1|  473|Caenorhabditis elegans Hypothetical pr...    34   0.067
U80815-6|AAO91675.1|  464|Caenorhabditis elegans Hypothetical pr...    34   0.067
U80815-5|AAO91676.1|  439|Caenorhabditis elegans Hypothetical pr...    34   0.067
U80815-4|AAO91674.1|  524|Caenorhabditis elegans Hypothetical pr...    34   0.067
U80815-3|AAK73899.1|  499|Caenorhabditis elegans Hypothetical pr...    34   0.067
U43283-3|AAC69024.2|  880|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AF098986-6|AAC67427.1|  484|Caenorhabditis elegans Hypothetical ...    29   2.5  
Z69791-4|CAA93658.2|  362|Caenorhabditis elegans Hypothetical pr...    28   3.3  
U23518-1|AAC70883.1|  124|Caenorhabditis elegans Hypothetical pr...    28   3.3  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    28   4.4  
AF067618-1|AAC19199.2| 1174|Caenorhabditis elegans Hypothetical ...    27   5.8  
AC093703-2|AAL77187.3|  473|Caenorhabditis elegans Hypothetical ...    27   5.8  

>U97193-6|AAV34803.1|  780|Caenorhabditis elegans Hypothetical
           protein C06A5.3a protein.
          Length = 780

 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
 Frame = +3

Query: 135 PGDIVWGKVIGFPWWPGRVLSVTS---ASRAHVAWFASTTSSLMPCDSLSPFLEDYKLHF 305
           PGD++W K+ GFP WP +VL  +    A R  V +F +  +S M  + LS +L +  +H 
Sbjct: 15  PGDLIWAKMKGFPPWPAKVLERSEDAPARRIPVMFFGTLETSFMKPNDLSDYLPNRLIHE 74

Query: 306 NKKKRGPYKEAVKQ 347
             +K+  + +AV++
Sbjct: 75  IPRKQKDFNKAVQE 88


>U97193-5|AAV34804.1|  783|Caenorhabditis elegans Hypothetical
           protein C06A5.3b protein.
          Length = 783

 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
 Frame = +3

Query: 135 PGDIVWGKVIGFPWWPGRVLSVTS---ASRAHVAWFASTTSSLMPCDSLSPFLEDYKLHF 305
           PGD++W K+ GFP WP +VL  +    A R  V +F +  +S M  + LS +L +  +H 
Sbjct: 15  PGDLIWAKMKGFPPWPAKVLERSEDAPARRIPVMFFGTLETSFMKPNDLSDYLPNRLIHE 74

Query: 306 NKKKRGPYKEAVKQ 347
             +K+  + +AV++
Sbjct: 75  IPRKQKDFNKAVQE 88


>U80815-10|AAO91678.1|  437|Caenorhabditis elegans Hypothetical
           protein W02C12.3g protein.
          Length = 437

 Score = 33.9 bits (74), Expect = 0.067
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = -2

Query: 181 GHHGNPITLPHTISPG--EILNNLLPTPSVDVGGNSGTVS 68
           GH G+PIT+P+ +S    +++++  PT S+D+    G VS
Sbjct: 178 GHSGSPITIPNAMSNNFRQVVSSSAPTSSIDIEKMIGAVS 217


>U80815-9|AAV34785.1|  361|Caenorhabditis elegans Hypothetical
           protein W02C12.3h protein.
          Length = 361

 Score = 33.9 bits (74), Expect = 0.067
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = -2

Query: 181 GHHGNPITLPHTISPG--EILNNLLPTPSVDVGGNSGTVS 68
           GH G+PIT+P+ +S    +++++  PT S+D+    G VS
Sbjct: 41  GHSGSPITIPNAMSNNFRQVVSSSAPTSSIDIEKMIGAVS 80


>U80815-8|AAB37997.1|  498|Caenorhabditis elegans Hypothetical
           protein W02C12.3a protein.
          Length = 498

 Score = 33.9 bits (74), Expect = 0.067
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = -2

Query: 181 GHHGNPITLPHTISPG--EILNNLLPTPSVDVGGNSGTVS 68
           GH G+PIT+P+ +S    +++++  PT S+D+    G VS
Sbjct: 178 GHSGSPITIPNAMSNNFRQVVSSSAPTSSIDIEKMIGAVS 217


>U80815-7|AAO91677.1|  473|Caenorhabditis elegans Hypothetical
           protein W02C12.3f protein.
          Length = 473

 Score = 33.9 bits (74), Expect = 0.067
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = -2

Query: 181 GHHGNPITLPHTISPG--EILNNLLPTPSVDVGGNSGTVS 68
           GH G+PIT+P+ +S    +++++  PT S+D+    G VS
Sbjct: 153 GHSGSPITIPNAMSNNFRQVVSSSAPTSSIDIEKMIGAVS 192


>U80815-6|AAO91675.1|  464|Caenorhabditis elegans Hypothetical
           protein W02C12.3d protein.
          Length = 464

 Score = 33.9 bits (74), Expect = 0.067
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = -2

Query: 181 GHHGNPITLPHTISPG--EILNNLLPTPSVDVGGNSGTVS 68
           GH G+PIT+P+ +S    +++++  PT S+D+    G VS
Sbjct: 144 GHSGSPITIPNAMSNNFRQVVSSSAPTSSIDIEKMIGAVS 183


>U80815-5|AAO91676.1|  439|Caenorhabditis elegans Hypothetical
           protein W02C12.3e protein.
          Length = 439

 Score = 33.9 bits (74), Expect = 0.067
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = -2

Query: 181 GHHGNPITLPHTISPG--EILNNLLPTPSVDVGGNSGTVS 68
           GH G+PIT+P+ +S    +++++  PT S+D+    G VS
Sbjct: 119 GHSGSPITIPNAMSNNFRQVVSSSAPTSSIDIEKMIGAVS 158


>U80815-4|AAO91674.1|  524|Caenorhabditis elegans Hypothetical
           protein W02C12.3c protein.
          Length = 524

 Score = 33.9 bits (74), Expect = 0.067
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = -2

Query: 181 GHHGNPITLPHTISPG--EILNNLLPTPSVDVGGNSGTVS 68
           GH G+PIT+P+ +S    +++++  PT S+D+    G VS
Sbjct: 204 GHSGSPITIPNAMSNNFRQVVSSSAPTSSIDIEKMIGAVS 243


>U80815-3|AAK73899.1|  499|Caenorhabditis elegans Hypothetical
           protein W02C12.3b protein.
          Length = 499

 Score = 33.9 bits (74), Expect = 0.067
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = -2

Query: 181 GHHGNPITLPHTISPG--EILNNLLPTPSVDVGGNSGTVS 68
           GH G+PIT+P+ +S    +++++  PT S+D+    G VS
Sbjct: 179 GHSGSPITIPNAMSNNFRQVVSSSAPTSSIDIEKMIGAVS 218


>U43283-3|AAC69024.2|  880|Caenorhabditis elegans Hypothetical
           protein T25G12.6 protein.
          Length = 880

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
 Frame = -2

Query: 232 NQATCALDADVTLRTLPGHHGNPITLPHT----ISPGEILNNL-LPTPSVDVG------- 89
           +Q TC   +D TL T  G  G  +T+P T    +  G     + +PT +  V        
Sbjct: 190 SQMTCRSVSDSTLITTSGPSGTTVTVPTTPCASVPTGPTKTPVTVPTSTGSVSRETKSPV 249

Query: 88  -GNSG-TVSLSHSSDPLSVTSFSPHFSLVP 5
             N G TVS S SS P++V + SP  +  P
Sbjct: 250 TANPGSTVSTSLSSKPVTVVTQSPRSTTTP 279


>AF098986-6|AAC67427.1|  484|Caenorhabditis elegans Hypothetical
           protein C36C9.5 protein.
          Length = 484

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
 Frame = -2

Query: 184 PGHHGNPITLPHTISPGE-----ILNNLLPTPSVDVGGNSGTVSLSHSSDPLSVTSFSPH 20
           PGH+G+  ++ H   PG       LN+ LP P      N+ T ++ HSS P    S+  H
Sbjct: 297 PGHNGSTYSMLHNSMPGAQRAYFNLNSGLPCPE----HNAHTYNMLHSSIP---GSYRSH 349

Query: 19  FSLV 8
            +L+
Sbjct: 350 LNLI 353


>Z69791-4|CAA93658.2|  362|Caenorhabditis elegans Hypothetical
           protein F39D8.3 protein.
          Length = 362

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +3

Query: 336 AVKQATLEAKRNESQLSDPLASPTHLATLSPRP-IDVFS 449
           A+K++  EAK+  + +++P+A+PT     +P P  D FS
Sbjct: 46  AIKKSLEEAKQVSNNITEPVATPTSENLDAPTPQADAFS 84


>U23518-1|AAC70883.1|  124|Caenorhabditis elegans Hypothetical
           protein F21D12.2 protein.
          Length = 124

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +3

Query: 12  REKCGENEVTESGSDEWESETVPEFPPTSTEG 107
           R  C EN V E G+DE+E E   E      EG
Sbjct: 51  RPDCLENTVVEQGNDEYEPENDEETTYPDDEG 82


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
 Frame = -2

Query: 232  NQATCALDADVTLRTLPGHHGNPI---TLPHTISPGEILNNLLPTP--SVDVGGNSGTVS 68
            N +T +  + +T    P    +P+   T P   SPG  L +  P+P  S  +G   G+ S
Sbjct: 856  NPSTSSGSSMITQSPYPSQSTSPVESSTTPSPGSPGTTLTSTSPSPSQSTTIGSTQGSTS 915

Query: 67   LSHSSDPLSVTS 32
               S+    +TS
Sbjct: 916  PGISTTSEEMTS 927


>AF067618-1|AAC19199.2| 1174|Caenorhabditis elegans Hypothetical
           protein F56H1.3 protein.
          Length = 1174

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 130 ILNNL-LPTPSVDVGGNSGTVSLSHSSDPLSVTSFSPHFSLVPN 2
           + NNL +P PSV V G   +  L H S+ +    F  HF+L  N
Sbjct: 345 VFNNLNVPLPSV-VAGFLSSSDLLHISEDIKSPWFKKHFALGAN 387


>AC093703-2|AAL77187.3|  473|Caenorhabditis elegans Hypothetical
           protein Y20F4.2 protein.
          Length = 473

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -2

Query: 172 GNPITLPHTISPGEILNNLLPTPSVDVGGNSGTVSLSHSSDPLSVTSFSPHFS 14
           G+P+ + H I P   + N     +  +GG +  +S  H+  PL     SPH S
Sbjct: 243 GSPVQMHHQIPPPLQMGN-----NQQMGGGNNGMSPYHNGSPLHSPMDSPHAS 290


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,950,945
Number of Sequences: 27780
Number of extensions: 260344
Number of successful extensions: 717
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)