Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0784
         (547 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4UBU6 Cluster: Putative uncharacterized protein; n=1; ...    33   5.7  
UniRef50_Q4SBY4 Cluster: Chromosome 2 SCAF14661, whole genome sh...    32   9.9  

>UniRef50_Q4UBU6 Cluster: Putative uncharacterized protein; n=1;
            Theileria annulata|Rep: Putative uncharacterized protein
            - Theileria annulata
          Length = 1764

 Score = 32.7 bits (71), Expect = 5.7
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = -2

Query: 273  ECYYSFFLKYVTKISLDTLYLLNFM*IYGIRKLHCIYFTWYLWVMLMR 130
            +C Y+++ K + K +LD  +L NF  I  + K + I   WY  ++  R
Sbjct: 1091 KCIYNYWYKLIKKNNLDENFLENFNIIINLIKKNYIIIYWYKLLLTQR 1138


>UniRef50_Q4SBY4 Cluster: Chromosome 2 SCAF14661, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 2
           SCAF14661, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 375

 Score = 31.9 bits (69), Expect = 9.9
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 297 LDTEMVFIECYYSFFLKYVTKISLDTLYLLN 205
           L T ++ I C++S +L Y   I LDTL +LN
Sbjct: 263 LKTTVILILCFFSCWLPYCVGIFLDTLMMLN 293


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,665,672
Number of Sequences: 1657284
Number of extensions: 8155432
Number of successful extensions: 16177
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16176
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)