Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0784
         (547 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030641-1|AAH30641.1|  518|Homo sapiens motile sperm domain con...    31   2.6  
AK093075-1|BAC04043.1|  455|Homo sapiens protein ( Homo sapiens ...    31   2.6  
AK131562-1|BAD18695.1|  867|Homo sapiens protein ( Homo sapiens ...    30   4.6  

>BC030641-1|AAH30641.1|  518|Homo sapiens motile sperm domain
           containing 2 protein.
          Length = 518

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -2

Query: 375 RKGRCSNSLQL*VNFDLDHTEHNLTGLDTEMVFIECYYSFFLKYVTKISL-DTLYLLN 205
           R  +  N   + V FDL  T  N   +D     I C+  ++ KY++KI + D  +L+N
Sbjct: 135 RYAKRENGKPVTVMFDLSETGINSIDMDFVRFIINCFKVYYPKYLSKIVIFDMPWLMN 192


>AK093075-1|BAC04043.1|  455|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35756 fis, clone TESTI2004687. ).
          Length = 455

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -2

Query: 375 RKGRCSNSLQL*VNFDLDHTEHNLTGLDTEMVFIECYYSFFLKYVTKISL-DTLYLLN 205
           R  +  N   + V FDL  T  N   +D     I C+  ++ KY++KI + D  +L+N
Sbjct: 72  RYAKRENGKPVTVMFDLSETGINSIDMDFVRFIINCFKVYYPKYLSKIVIFDMPWLMN 129


>AK131562-1|BAD18695.1|  867|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16811 fis, clone THYMU3024602, highly  similar
           to Cell surface glycoprotein EMR1 precursor. ).
          Length = 867

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 14/58 (24%), Positives = 28/58 (48%)
 Frame = -2

Query: 285 MVFIECYYSFFLKYVTKISLDTLYLLNFM*IYGIRKLHCIYFTWYLWVMLMRVTVLSA 112
           ++ +  YY+   K V K     L  L F       +++ +  TW LW++  R++ ++A
Sbjct: 709 VIVVSKYYNSLAKCVLKEEQGDLRDLEFPGTCAAERINSLLLTWTLWILRQRLSSVNA 766


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,222,477
Number of Sequences: 237096
Number of extensions: 1237000
Number of successful extensions: 5092
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5092
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)