Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0784
         (547 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   1.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   2.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   2.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   2.7  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = -2

Query: 180 KLHCIYFTWYLWVMLMRVTVLSALLYVKLLRLGY 79
           KL  + F W +  +++ + ++S ++Y+  + L Y
Sbjct: 391 KLVLLNFGWQMICLIVVIALVSIIMYIAFIILQY 424


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 282 VFIECYYSFFLKYV 241
           VF+ C+  FFL YV
Sbjct: 335 VFVVCWLPFFLMYV 348


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 282 VFIECYYSFFLKYV 241
           VF+ C+  FFL YV
Sbjct: 335 VFVVCWLPFFLMYV 348


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 282 VFIECYYSFFLKYV 241
           VF+ C+  FFL YV
Sbjct: 335 VFVVCWLPFFLMYV 348


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,904
Number of Sequences: 438
Number of extensions: 2661
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)