Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0783
(473 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 202 4e-51
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 199 3e-50
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 187 1e-46
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 183 2e-45
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 157 1e-37
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 149 3e-35
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 148 5e-35
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 146 3e-34
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 124 8e-28
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 112 4e-24
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 103 2e-21
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 100 1e-20
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 76 3e-13
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 74 1e-12
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 69 4e-11
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 68 9e-11
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 59 4e-08
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 59 6e-08
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 56 4e-07
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 54 2e-06
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 48 1e-04
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 43 0.003
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 42 0.005
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 37 0.26
UniRef50_UPI00006CDDBC Cluster: hypothetical protein TTHERM_0029... 36 0.46
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 36 0.60
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 35 1.1
UniRef50_Q589S4 Cluster: HMG protein TCF/LEF; n=1; Dugesia japon... 33 3.2
UniRef50_Q0UX35 Cluster: Putative uncharacterized protein; n=1; ... 32 5.6
UniRef50_Q478C5 Cluster: Regulatory protein, LysR:LysR, substrat... 32 7.4
UniRef50_Q8I5A6 Cluster: Putative uncharacterized protein; n=1; ... 32 7.4
UniRef50_A5K9F1 Cluster: Putative uncharacterized protein; n=1; ... 32 7.4
UniRef50_Q4P153 Cluster: Putative uncharacterized protein; n=1; ... 32 7.4
UniRef50_Q18VR2 Cluster: Phage integrase; n=2; Clostridiales|Rep... 31 9.8
UniRef50_A5ASD2 Cluster: Putative uncharacterized protein; n=8; ... 31 9.8
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 202 bits (492), Expect = 4e-51
Identities = 94/134 (70%), Positives = 103/134 (76%)
Frame = +3
Query: 72 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 251
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 252 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 431
T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAAY TG
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 432 XXXXXXXXEYNVEP 473
E+NVEP
Sbjct: 121 GCTEVTGEEFNVEP 134
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 199 bits (485), Expect = 3e-50
Identities = 92/133 (69%), Positives = 103/133 (77%)
Frame = +3
Query: 72 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 251
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 252 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 431
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 432 XXXXXXXXEYNVE 470
EYNVE
Sbjct: 121 GQVEVTGDEYNVE 133
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 187 bits (456), Expect = 1e-46
Identities = 84/102 (82%), Positives = 94/102 (92%)
Frame = +3
Query: 72 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 251
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 252 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 377
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATG 102
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 183 bits (445), Expect = 2e-45
Identities = 81/89 (91%), Positives = 87/89 (97%)
Frame = +3
Query: 72 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 251
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 252 TCQVAYSRIEGDHIVCAAYSHELPRYGVK 338
TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 61 TCQIAYSRIEGDKILCAAYSHELPRYGVK 89
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 157 bits (381), Expect = 1e-37
Identities = 66/102 (64%), Positives = 89/102 (87%)
Frame = +3
Query: 72 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 251
M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDI 83
Query: 252 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 377
Q+ ++I GD +V AAY+HELP +G++ GLTNYAAAY+TG
Sbjct: 84 IAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYATG 125
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 149 bits (361), Expect = 3e-35
Identities = 66/102 (64%), Positives = 82/102 (80%)
Frame = +3
Query: 72 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 251
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 252 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 377
CQV Y+ ++GD +V AA S EL R+G+ GLTNYAAAY+TG
Sbjct: 61 ICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYATG 102
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 148 bits (359), Expect = 5e-35
Identities = 69/102 (67%), Positives = 80/102 (78%)
Frame = +3
Query: 72 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 251
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 252 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 377
CQ+A S IEGD I+ A S EL RYG+ VGL NYAAAY+TG
Sbjct: 61 ICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYATG 102
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 146 bits (353), Expect = 3e-34
Identities = 65/99 (65%), Positives = 77/99 (77%), Gaps = 2/99 (2%)
Frame = +3
Query: 87 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 260
V K Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 261 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 377
V Y+ + GD +CAAYSHELP+YG+K GLTNYAA Y+TG
Sbjct: 73 VVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYATG 111
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 124 bits (300), Expect = 8e-28
Identities = 54/98 (55%), Positives = 70/98 (71%)
Frame = +3
Query: 84 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 263
K+VKN YF R+Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 264 AYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 377
+ + GD VC A S ELP+YG+K+GL+NY AAY+TG
Sbjct: 64 VVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYATG 101
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 112 bits (269), Expect = 4e-24
Identities = 46/85 (54%), Positives = 66/85 (77%)
Frame = +3
Query: 123 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCA 302
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Query: 303 AYSHELPRYGVKVGLTNYAAAYSTG 377
A S+EL R+GV GL +YAAAY+TG
Sbjct: 367 ADSYELKRFGVSTGLASYAAAYATG 391
Score = 45.2 bits (102), Expect = 7e-04
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3
Query: 72 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 164
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 103 bits (247), Expect = 2e-21
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = +3
Query: 72 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 251
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 252 TCQVAYSRIEGD 287
T Q+ + I GD
Sbjct: 72 TAQIISASIAGD 83
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 100 bits (240), Expect = 1e-20
Identities = 44/93 (47%), Positives = 63/93 (67%)
Frame = +3
Query: 99 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 278
+ Y K +QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 279 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 377
+GD ++ A S EL RYG+ G TNY+AAY+TG
Sbjct: 64 DGDRVMVYADSRELERYGINFGATNYSAAYATG 96
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 76.2 bits (179), Expect = 3e-13
Identities = 35/94 (37%), Positives = 56/94 (59%)
Frame = +3
Query: 96 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 275
N Y R+++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 276 IEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 377
++GD I+ ++Y L + K NY +Y G
Sbjct: 69 VDGDFILLSSYLKNLSKLEYKNLTNNYPFSYLLG 102
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.1 bits (174), Expect = 1e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +3
Query: 222 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 377
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 69.3 bits (162), Expect = 4e-11
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +3
Query: 114 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 293
RY+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 294 VCAAYSHEL-PRYGVKVGLTNYAAAYSTG 377
+ AA+S EL ++G K N AAY TG
Sbjct: 59 IAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 68.1 bits (159), Expect = 9e-11
Identities = 38/88 (43%), Positives = 50/88 (56%)
Frame = +3
Query: 114 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 293
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDST 58
Query: 294 VCAAYSHELPRYGVKVGLTNYAAAYSTG 377
+ AAYS EL YG + + AAY TG
Sbjct: 59 LVAAYSAELAGYGYEGSTASTPAAYLTG 86
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 59.7 bits (138), Expect = 3e-08
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +3
Query: 234 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 377
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTG 51
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 59.3 bits (137), Expect = 4e-08
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +3
Query: 114 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 293
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDIT 58
Query: 294 VCAAYSHELPRYGVKVGLTNYAAAYSTG 377
+A S EL +YG N AAY TG
Sbjct: 59 YSSAVSSELAKYGYTGATGNTTAAYLTG 86
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 58.8 bits (136), Expect = 6e-08
Identities = 34/88 (38%), Positives = 48/88 (54%)
Frame = +3
Query: 114 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 293
RY+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 294 VCAAYSHELPRYGVKVGLTNYAAAYSTG 377
+ +A+S +L YG + N +AY TG
Sbjct: 59 LASAHSSDLAEYGWEAPTGNMPSAYLTG 86
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 56.0 bits (129), Expect = 4e-07
Identities = 22/32 (68%), Positives = 30/32 (93%)
Frame = +3
Query: 120 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPK 215
+++F+R +EGKTDYYARKRL +QDKN+YNTP+
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 53.6 bits (123), Expect = 2e-06
Identities = 33/87 (37%), Positives = 47/87 (54%)
Frame = +3
Query: 117 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 296
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD +
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETL 59
Query: 297 CAAYSHELPRYGVKVGLTNYAAAYSTG 377
+A S L +G N +AAY TG
Sbjct: 60 VSATSKNLKEFGWLGNGKNTSAAYLTG 86
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 47.6 bits (108), Expect = 1e-04
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = +3
Query: 72 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNK 245
M + K++KN YF ++ VK +R R+ T Y R + NK + K+R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 246 DVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 377
+++ + +S + GD IV A S +L ++G+ N +Y G
Sbjct: 59 NLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSYFIG 102
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 43.2 bits (97), Expect = 0.003
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +3
Query: 111 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 290
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 291 IVCAAYSHEL-PRYG--VKVGLTNYAAAYSTG 377
++ + L R+G + + A+Y TG
Sbjct: 58 VIISVTGKTLVDRFGWPLDASRKSVPASYLTG 89
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 42.3 bits (95), Expect = 0.005
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 129 FKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAA 305
FKR+ G TDY R +L+ + + K R IVR++ K V QVA YS I GD I+
Sbjct: 6 FKRKEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTV 57
Query: 306 YSHELPRYGVKVGLTNYAAAYSTG 377
L +YGV + N Y G
Sbjct: 58 TDKTLAKYGVDLRGNNIQVCYLVG 81
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 36.7 bits (81), Expect = 0.26
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +3
Query: 132 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 311
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH++ +
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVLVTVTN 60
Query: 312 HELPR 326
L +
Sbjct: 61 KTLKK 65
>UniRef50_UPI00006CDDBC Cluster: hypothetical protein TTHERM_00295350;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00295350 - Tetrahymena thermophila SB210
Length = 1346
Score = 35.9 bits (79), Expect = 0.46
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Frame = -1
Query: 236 ETHNQTIFRCVIFVLVLNNEAFTSIIISFPFTTPLE---FYLVPLEVLFVLH---NFNES 75
+T+ I++ VI ++ N+E I PF+ PLE FY P+ V L ++N
Sbjct: 1118 QTNMTQIYKEVIKTIIANSEFDKKSITFEPFSFPLEYVYFYPTPIGVAIKLKLSASWNAG 1177
Query: 74 HILNLSYKVASTDASCRI 21
LNLS+K A+ D S +
Sbjct: 1178 FNLNLSFKNATLDLSAGV 1195
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 35.5 bits (78), Expect = 0.60
Identities = 22/82 (26%), Positives = 43/82 (52%)
Frame = +3
Query: 132 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 311
+R RE KT+Y ++R ++ + + T V +SN++ Q+ +++GD ++ + +S
Sbjct: 8 RRLREEKTNY-KKRRSMLMGRRDFVT------VHISNENAQVQIHAPKMDGDVVIASGHS 60
Query: 312 HELPRYGVKVGLTNYAAAYSTG 377
L G K + A+Y TG
Sbjct: 61 RYLASKGWKGSRKSIPASYLTG 82
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 34.7 bits (76), Expect = 1.1
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +3
Query: 72 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 251
+ F +V+ ++YF RY + + D+ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 252 TCQVA 266
C +A
Sbjct: 161 QCSLA 165
>UniRef50_Q589S4 Cluster: HMG protein TCF/LEF; n=1; Dugesia
japonica|Rep: HMG protein TCF/LEF - Dugesia japonica
(Planarian)
Length = 263
Score = 33.1 bits (72), Expect = 3.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 3 DPPGCRNSARGVC 41
DPPGCRNSARG C
Sbjct: 8 DPPGCRNSARGEC 20
>UniRef50_Q0UX35 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 503
Score = 32.3 bits (70), Expect = 5.6
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 372 LNMLQHNLSDQPSHHNVATHVNKQRTQYGHLQSESRPP 259
LN LQ +L D PSH T V + Q H Q + PP
Sbjct: 21 LNRLQPSLEDPPSHLQALTKVVMMQHQIPHQQQHALPP 58
>UniRef50_Q478C5 Cluster: Regulatory protein, LysR:LysR,
substrate-binding; n=1; Dechloromonas aromatica RCB|Rep:
Regulatory protein, LysR:LysR, substrate-binding -
Dechloromonas aromatica (strain RCB)
Length = 327
Score = 31.9 bits (69), Expect = 7.4
Identities = 18/80 (22%), Positives = 40/80 (50%)
Frame = +3
Query: 120 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVC 299
++K + R+G YY+ + V+ + +Y+ P RL+ +++ + A E H+
Sbjct: 4 RIKSRASRQGNW-YYSNQAFVLDETMRYDLPDLRLVAAIADSGSLTRAA----EQVHLAP 58
Query: 300 AAYSHELPRYGVKVGLTNYA 359
++ SH L + +G+ +A
Sbjct: 59 SSASHRLTQLEAALGIPLFA 78
>UniRef50_Q8I5A6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1936
Score = 31.9 bits (69), Expect = 7.4
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 84 KVVKNKQYFKRYQVKFKRRREG-KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 251
+++K + F+ ++ +KR+RE K+ Y + V+++ NKYN + I L++KD+
Sbjct: 1107 ELLKKNRSFENHEQIYKRQREKLKSHYKSSMSKVIENSNKYNN-LIKDIEALNSKDI 1162
>UniRef50_A5K9F1 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 970
Score = 31.9 bits (69), Expect = 7.4
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = -1
Query: 224 QTIFRCVIFVLVLNNEAFTSIIISFPFTTPLEFYLVPLEVLFVLHN 87
+T ++CVI V++ + E+ +I+ +PF P + P + F ++N
Sbjct: 869 ETDWKCVIAVIIKSKESLKNILNEYPFEIPTALF-QPFKSFFFMYN 913
>UniRef50_Q4P153 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 534
Score = 31.9 bits (69), Expect = 7.4
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = -3
Query: 408 VFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRTQYGHLQSESRPPGMLHLCWRDA 229
+F A+ DQ +L H++++ H+ A+H Q Q H Q + P + H A
Sbjct: 120 IFSAMNAAQFDQYGLLSHSVANASHQHHAASH-QHQHHQQPHHQHAAFNPALGHA----A 174
Query: 228 QSDDI 214
Q DDI
Sbjct: 175 QGDDI 179
>UniRef50_Q18VR2 Cluster: Phage integrase; n=2; Clostridiales|Rep:
Phage integrase - Desulfitobacterium hafniense (strain
DCB-2)
Length = 317
Score = 31.5 bits (68), Expect = 9.8
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 156 DYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEG--DHIVCAAYSHELPRY 329
D + +++ + K +Y I + NK +T + Y + E D + C + LPR
Sbjct: 171 DIDLKMSMLIVPRTKNGKQRYIPISKSLNKILTDYLDYRKAESEEDFLFCNEFGQYLPRT 230
Query: 330 GVKVGLTNY 356
+++G+T Y
Sbjct: 231 TLQIGITKY 239
>UniRef50_A5ASD2 Cluster: Putative uncharacterized protein; n=8;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1801
Score = 31.5 bits (68), Expect = 9.8
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -3
Query: 372 LNMLQHNLSDQPSHHNVATHVNKQRTQYGHLQSESRPPGMLHLCW 238
LN+++ DQ SHH + N R+ H+ + G + CW
Sbjct: 346 LNIMEATPEDQHSHHGHQDNPNAFRSMRDHMHPPPKENGKFYECW 390
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,485,211
Number of Sequences: 1657284
Number of extensions: 9224415
Number of successful extensions: 23255
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 22698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23229
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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