Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0783
         (473 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   3.3  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   4.4  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   4.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   7.7  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 11/48 (22%), Positives = 24/48 (50%)
 Frame = +3

Query: 120 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 263
           + +FK       + +A+K +VV+DK K  + +  + + +   D  C +
Sbjct: 198 KTRFKTINNILENLWAKKLIVVKDKKKSRSDEQTIDICMRCHDQLCDM 245


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 274 GLKVTILCALLIHMSCHVMV*RLV*QIMLQHIQLVCY*HEDC 399
           G K  IL  +L  ++C VMV   +     + IQ+V Y + +C
Sbjct: 182 GNKPVILTVVLPLLACGVMVVTHITMAHFKIIQVVPYCYINC 223


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 18 RNSARGVCGRH 50
          RNSA  +CG H
Sbjct: 31 RNSAPSICGEH 41


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 402 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNK 304
           E + +L ++ LNM Q +     SH  ++  VN+
Sbjct: 301 EQMNLLHSNDLNMHQQHHQQNMSHEELSAMVNR 333


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 45   VHRRLVPNSCSPG 7
            V+  LVP +C+PG
Sbjct: 1225 VNGHLVPQNCAPG 1237


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -3

Query: 402  EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 295
            +A  + IAD L ML   L       + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -3

Query: 402  EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 295
            +A  + IAD L ML   L       + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -3

Query: 402  EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 295
            +A  + IAD L ML   L       + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -3

Query: 402  EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 295
            +A  + IAD L ML   L       + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +3

Query: 12  GCRNSARGVCGRH 50
           GC   + G+CG H
Sbjct: 103 GCEMPSAGLCGSH 115


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = -3

Query: 381 ADQLNMLQHNLSDQPSHHNVATHVNKQRTQYGH 283
           A Q N      ++Q  HH+   H++ Q     H
Sbjct: 307 AQQQNNNNAATNNQNHHHHAGHHIHAQHHVVNH 339


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
          ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +3

Query: 12 GCRNSARGVCGRH 50
          GC   + G+CG H
Sbjct: 51 GCEMPSAGLCGSH 63


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +3

Query: 12  GCRNSARGVCGRH 50
           GC   + G+CG H
Sbjct: 234 GCEMPSAGLCGSH 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,538
Number of Sequences: 336
Number of extensions: 2643
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)