Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0783
         (473 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   204   1e-54
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     23   4.1  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   7.2  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   7.2  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    22   9.5  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    22   9.5  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    22   9.5  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  204 bits (498), Expect = 1e-54
 Identities = 91/102 (89%), Positives = 98/102 (96%)
 Frame = +3

Query: 72  MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 251
           MGFVKVVKNKQYFKRYQV+F+RRREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+
Sbjct: 1   MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60

Query: 252 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 377
           TCQ+AY RIEGD IVCAAYSHELPRYGVKVGLTNYAAAY TG
Sbjct: 61  TCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTG 102


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 309 NKQRTQYGHLQSESRPPGML 250
           +KQ  +Y H   E +PPG L
Sbjct: 152 SKQALKYYHYYLEGQPPGQL 171


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 182 CSGQEQI*HT*ISSDCASLQQRCNMP 259
           C G   I H    S+CA   QRC+ P
Sbjct: 553 CGGAHHIGH----SECARSAQRCSRP 574


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +3

Query: 111 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYR 221
           KR+ V   R   GK++++   + V+ D+  +  P+ R
Sbjct: 25  KRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLRPEQR 61


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 160 IMLVNASLFRTRTNITHLNI 219
           +M +N SLF   TN+T  N+
Sbjct: 468 VMNINGSLFLFLTNMTFQNV 487


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 160 IMLVNASLFRTRTNITHLNI 219
           +M +N SLF   TN+T  N+
Sbjct: 468 VMNINGSLFLFLTNMTFQNV 487


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 160 IMLVNASLFRTRTNITHLNI 219
           +M +N SLF   TN+T  N+
Sbjct: 446 VMNINGSLFLFLTNMTFQNV 465


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,976
Number of Sequences: 2352
Number of extensions: 10710
Number of successful extensions: 36
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)