Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0782
         (618 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g12230.1 68416.m01526 serine carboxypeptidase S10 family prot...    28   5.7  
At3g12240.1 68416.m01527 serine carboxypeptidase S10 family prot...    27   7.5  
At3g20520.1 68416.m02598 glycerophosphoryl diester phosphodieste...    27   10.0 
At1g75120.1 68414.m08724 expressed protein                             27   10.0 

>At3g12230.1 68416.m01526 serine carboxypeptidase S10 family protein
           contains Pfam profile: PF00450 serine carboxypeptidase;
           similar to serine carboxypeptidase I precursor
           (SP:P37890) [Oryza sativa]
          Length = 435

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 452 FTKLFENKFK*GYQKNKSHVYEYKTKQNSI 541
           +TK + NK      K   H  EYK ++NSI
Sbjct: 395 YTKTYANKMTLATVKGGGHTLEYKPEENSI 424


>At3g12240.1 68416.m01527 serine carboxypeptidase S10 family protein
           contains Pfam profile: PF00450 serine carboxypeptidase;
           similar to serine carboxypeptidase I precursor
           (SP:P37890) [Oryza sativa]
          Length = 436

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 452 FTKLFENKFK*GYQKNKSHVYEYKTKQNSI 541
           +TK + NK      K   H  EYK ++NS+
Sbjct: 396 YTKTYANKMTLATVKGGGHTLEYKPEENSV 425


>At3g20520.1 68416.m02598 glycerophosphoryl diester
           phosphodiesterase family protein contains Pfam PF03009 :
           Glycerophosphoryl diester phosphodiesterase family;
           similar to glycerophosphodiester phosphodiesterase
           (GI:1399038) [Borrelia hermsii]
          Length = 729

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 489 IKKTKAMYTNTKLNKILSKFQTLSSFLTKPNK 584
           ++K   ++ N + NK   KF TLS FL  PN+
Sbjct: 436 LEKDSGLFRNPRNNKA-GKFLTLSEFLFLPNR 466


>At1g75120.1 68414.m08724 expressed protein 
          Length = 402

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/38 (28%), Positives = 25/38 (65%)
 Frame = +1

Query: 70  YLFYPSFNPITGIYAMVKQLCIHDYVLL*SKKIIAKTL 183
           +LFYPS    TG+YA  + + +++++   + +++ KT+
Sbjct: 320 HLFYPSHPGYTGLYASKRVMDVYEFM---NSRVLFKTV 354


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,480,425
Number of Sequences: 28952
Number of extensions: 239295
Number of successful extensions: 424
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)