Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0781
(485 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0902 - 22408895-22409620,22410190-22410326,22410550-224106... 30 1.1
08_01_0224 + 1789447-1789633,1789959-1790261,1793380-1793542,179... 30 1.1
02_01_0384 - 2781362-2782299,2782320-2782428 30 1.1
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 29 1.5
05_01_0192 + 1394342-1396645 29 2.0
01_01_1152 + 9170628-9171899 29 2.0
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 2.6
09_04_0752 + 19933604-19934278,19934679-19935387,19936118-199361... 28 3.5
01_06_0373 - 28841462-28842850 28 4.6
11_01_0052 - 396822-396965,397332-397541,397686-397815,397956-39... 27 6.0
07_01_0488 - 3678329-3678577,3678769-3678810,3678891-3678944,367... 27 6.0
06_03_0611 - 22721977-22722276,22722765-22722853,22722978-227230... 27 6.0
12_01_0013 - 99290-99299,99593-99703,100085-100587,100925-100995... 27 8.0
11_01_0013 - 103484-103493,103787-103897,104279-104781,105119-10... 27 8.0
08_01_0227 + 1827461-1827674,1827844-1828143,1828272-1828434,182... 27 8.0
05_02_0033 + 5847754-5847982,5848308-5848437,5849038-5849116,584... 27 8.0
03_03_0123 - 14621170-14621194,14621382-14623075 27 8.0
>08_02_0902 -
22408895-22409620,22410190-22410326,22410550-22410685,
22410787-22411224
Length = 478
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = +3
Query: 27 IRHEGHSRDAGHKHEDNHLFVYYRHRGNGS--RH--KSL*CAQKWKR 155
+RH+ + G+ +ED H + Y + NGS +H KSL A W R
Sbjct: 155 LRHKNLVKLIGYCYEDEHRMLVYEYMSNGSLEKHLFKSLDGAMPWMR 201
>08_01_0224 +
1789447-1789633,1789959-1790261,1793380-1793542,
1793561-1793597,1794305-1794925
Length = 436
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 397 IRHFKLNAFN*SKITAFTREFCSYSIVVREADSFQKLFMGFTIRS 263
+RH ++ +N + + FC+Y+I + D KL G I+S
Sbjct: 130 VRHREITEYNPKQFCSIPTRFCAYNIAFFDLDKESKLARGPPIKS 174
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -3
Query: 384 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLX 205
S++P R+RL S +SG P +SSS SPS A RGG ++ R
Sbjct: 211 SASPASPSRTRLAPPRSPPAGGASGAPR--RSSSAASPSCAGVEGPRGGEVDDGRRPRRG 268
Query: 204 P 202
P
Sbjct: 269 P 269
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/42 (28%), Positives = 28/42 (66%)
Frame = +2
Query: 314 DDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 439
+++++ A+K+ ++ ++KG+E+ A K++ G LDE+F
Sbjct: 594 NEESVANYCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDF 635
>05_01_0192 + 1394342-1396645
Length = 767
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 21 AGIRHEGHSRDAGHKHEDNHLFVYYRHRGNGSRHKSL 131
AG+RH R G HE + + Y + NGS K+L
Sbjct: 467 AGLRHRNLLRLQGWCHEKGEILLVYDYMRNGSLDKAL 503
>01_01_1152 + 9170628-9171899
Length = 423
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 200 QGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFP 313
QG++ ++S S LA +A + GET ELL +G P
Sbjct: 57 QGRNFIVSPLSFHAALALVADGARGETQRELLGFLGSP 94
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 332 TEFASKSRDLRSIKGVELKMANKVYVHDG 418
T+ S S+D++ ++ VE + N VHDG
Sbjct: 520 TQIPSASKDIKEVRAVEEFLPNDFVVHDG 548
>09_04_0752 +
19933604-19934278,19934679-19935387,19936118-19936161,
19936607-19936704,19937056-19937160,19937694-19937757,
19938316-19938885
Length = 754
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 372 LIDRRSRLLLANSVRIASSSGK 307
LIDRR RLL NS A++SGK
Sbjct: 643 LIDRRRRLLEVNSAVAAAASGK 664
>01_06_0373 - 28841462-28842850
Length = 462
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 215 VLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD 358
+L+ F LP L A+ GE EEL+ A G P A + RD
Sbjct: 125 ILAFFLYLPVLHAQTTANFGEMGEELVHAPGIPSFPATHSVLPLMERD 172
>11_01_0052 -
396822-396965,397332-397541,397686-397815,397956-398126,
398723-398827,398940-399613,399659-399688,399756-399932
Length = 546
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 332 TEFASKSRDLRSIKGVELKMANKVYVHDG 418
T+ S S+D++ ++ V+ + N VHDG
Sbjct: 139 TQIPSASKDIKEVRAVDEFLPNDFVVHDG 167
>07_01_0488 -
3678329-3678577,3678769-3678810,3678891-3678944,
3679149-3679212,3679316-3679410,3679477-3679584,
3679679-3679752,3680338-3680410,3680539-3680586,
3680694-3680877,3681262-3681440,3682167-3682259,
3682738-3682851,3683570-3683644,3683852-3684112,
3684821-3684934,3685473-3685529,3686668-3686863,
3686922-3686986,3687112-3687195,3688155-3688223,
3688545-3688844
Length = 865
Score = 27.5 bits (58), Expect = 6.0
Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Frame = +2
Query: 155 ITSQPECLPK**KIIQGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRT 334
+ +C P K++ + ++ V P L + S G+T + +++ G DAI T
Sbjct: 637 LNEMSKCSPPPAKVLSPYAPLIHVMKVKPNKVNLIIGSGGKTIKSIIEETGV---DAIDT 693
Query: 335 ----EFASKSRDLRSIKGVELKMANKVYVHDGGKLDENFAVVSXDVFNSDVQ 478
+RDL S++ + +AN V G++ N + + + + V+
Sbjct: 694 GDDGTVKITARDLSSLEKSKAIIANLTMVPKVGEIYRNCEIKTIAPYGAFVE 745
>06_03_0611 -
22721977-22722276,22722765-22722853,22722978-22723083,
22723178-22723306,22723803-22723887,22723994-22724103,
22724424-22724624,22725033-22725394,22725612-22725695,
22725791-22725916,22725999-22726161,22726378-22726536,
22727147-22727274,22727371-22727493,22727755-22727899,
22727992-22728068,22728318-22728696,22729325-22729411
Length = 950
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 159 VIVSIFEHIREICDGCHCRDGDSKQTNDCLHVCGLRLSNVPRA 31
VI S+ + + C GC C D + T C +VCG++ S + +A
Sbjct: 56 VINSVLDKPKFRC-GCKCVDVNG--TGSCQNVCGIQYSTLDQA 95
>12_01_0013 -
99290-99299,99593-99703,100085-100587,100925-100995,
101413-101491,102336-102956
Length = 464
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -3
Query: 177 KHSGCEVIVSIFEHIREICDGCHCRDG--DSKQTNDC 73
K GC+ + + + GCHC DG + + +DC
Sbjct: 386 KLEGCDQAIGSDAVVEALRGGCHCLDGFRNGNEISDC 422
>11_01_0013 -
103484-103493,103787-103897,104279-104781,105119-105189,
105607-105685,106530-107153
Length = 465
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -3
Query: 177 KHSGCEVIVSIFEHIREICDGCHCRDG--DSKQTNDC 73
K GC+ + + + GCHC DG + + +DC
Sbjct: 387 KLEGCDQAIGSDAVVEALRGGCHCLDGFRNGNEISDC 423
>08_01_0227 +
1827461-1827674,1827844-1828143,1828272-1828434,
1828453-1828489,1829207-1829737,1830677-1830829
Length = 465
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = -2
Query: 415 IMNVYFIRHFKLNAFN*SKITAFTREFCSYSIVVREADSFQKLFMGFTIRS 263
++N+ +R ++ +N + + FC+Y+I + D KL G I+S
Sbjct: 134 VLNI--VRRREITEYNPKQFCSIPTRFCAYNIAFFDLDKESKLARGPPIKS 182
>05_02_0033 +
5847754-5847982,5848308-5848437,5849038-5849116,
5849194-5849251,5849732-5850795,5850899-5851003,
5851369-5851473
Length = 589
Score = 27.1 bits (57), Expect = 8.0
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = -1
Query: 419 HHHERILYSPF*AQRL*LIEDHGFYSRILFV*HRRQGSR*LSKALHGFHHQKLKLTEREE 240
HH+ER L S + +I+DH Y R G S ++ H K+K E +
Sbjct: 127 HHNERFLKSRLSKLKWPMIQDHKNYLRTKRQRELMYGEAEFSSCMYD-HGDKVKFEEAFD 185
Query: 239 AAPKMPRGQRFXPGLF 192
A K + Q + ++
Sbjct: 186 AMRKKVQKQTWLDSIY 201
>03_03_0123 - 14621170-14621194,14621382-14623075
Length = 572
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -1
Query: 284 HGFHHQKLKLTEREEAAPKMPRGQRFXPGLFFTTSVNILAVKLSF 150
+G HQ+L++ + E A + RG+RF +V + +L F
Sbjct: 288 YGLVHQQLEVVAQLEYAVRARRGERFMTVAVRVDNVRVRVARLGF 332
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,699,592
Number of Sequences: 37544
Number of extensions: 248000
Number of successful extensions: 848
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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