Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0780
         (530 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125968-1|AAD14760.1|  182|Caenorhabditis elegans Hypothetical ...    31   0.68 
AC025727-10|AAK66029.1|  707|Caenorhabditis elegans Hypothetical...    30   1.2  
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U41552-7|AAU05560.1| 1174|Caenorhabditis elegans Hypothetical pr...    28   3.6  
U41552-6|AAU05561.1| 1203|Caenorhabditis elegans Hypothetical pr...    28   3.6  
AF022980-5|AAG24192.1|  328|Caenorhabditis elegans Serpentine re...    28   4.8  
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr...    27   6.3  

>AF125968-1|AAD14760.1|  182|Caenorhabditis elegans Hypothetical
           protein Y49G5A.1 protein.
          Length = 182

 Score = 30.7 bits (66), Expect = 0.68
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 440 KVLSGGVPCNACAESCAGMSCGAGRRCV 523
           K++ GG+P     +SC    C AG  CV
Sbjct: 145 KIVEGGIPTTIVGKSCKSKFCPAGATCV 172


>AC025727-10|AAK66029.1|  707|Caenorhabditis elegans Hypothetical
           protein Y73E7A.8 protein.
          Length = 707

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -1

Query: 524 PRNGVRRR-KTFRHMILHKHYTVLLPREPCRRIFRRYRNPWGSRRREIERPQYSIQRGSC 348
           PR  +++R KT R   +  HY  +LP +   R F ++RN    R R       SI   + 
Sbjct: 591 PRRPIKKRVKTQRTKTIKLHYGDVLPADEVNRKFPKFRNRNAHRARIFGIKTSSIPEETL 650

Query: 347 ATQT 336
             QT
Sbjct: 651 KIQT 654


>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
           protein F07A11.6e protein.
          Length = 2101

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 510 PAPQDIPAHDSAQALHGTPPERTL*KNISPL 418
           P P   P HD   A  GTPP R   + + PL
Sbjct: 562 PPPPIPPTHDEMMAPRGTPPSRRSSETMVPL 592


>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
           protein F07A11.6c protein.
          Length = 2392

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 510 PAPQDIPAHDSAQALHGTPPERTL*KNISPL 418
           P P   P HD   A  GTPP R   + + PL
Sbjct: 853 PPPPIPPTHDEMMAPRGTPPSRRSSETMVPL 883


>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
           protein F07A11.6b protein.
          Length = 2407

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 510 PAPQDIPAHDSAQALHGTPPERTL*KNISPL 418
           P P   P HD   A  GTPP R   + + PL
Sbjct: 868 PPPPIPPTHDEMMAPRGTPPSRRSSETMVPL 898


>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
           protein F07A11.6a protein.
          Length = 2211

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 510 PAPQDIPAHDSAQALHGTPPERTL*KNISPL 418
           P P   P HD   A  GTPP R   + + PL
Sbjct: 868 PPPPIPPTHDEMMAPRGTPPSRRSSETMVPL 898


>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
           protein F07A11.6e protein.
          Length = 2101

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 510 PAPQDIPAHDSAQALHGTPPERTL*KNISPL 418
           P P   P HD   A  GTPP R   + + PL
Sbjct: 562 PPPPIPPTHDEMMAPRGTPPSRRSSETMVPL 592


>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
           protein F07A11.6c protein.
          Length = 2392

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 510 PAPQDIPAHDSAQALHGTPPERTL*KNISPL 418
           P P   P HD   A  GTPP R   + + PL
Sbjct: 853 PPPPIPPTHDEMMAPRGTPPSRRSSETMVPL 883


>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
           protein F07A11.6b protein.
          Length = 2407

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 510 PAPQDIPAHDSAQALHGTPPERTL*KNISPL 418
           P P   P HD   A  GTPP R   + + PL
Sbjct: 868 PPPPIPPTHDEMMAPRGTPPSRRSSETMVPL 898


>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
           protein F07A11.6a protein.
          Length = 2211

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 510 PAPQDIPAHDSAQALHGTPPERTL*KNISPL 418
           P P   P HD   A  GTPP R   + + PL
Sbjct: 868 PPPPIPPTHDEMMAPRGTPPSRRSSETMVPL 898


>U41552-7|AAU05560.1| 1174|Caenorhabditis elegans Hypothetical
           protein K07E3.7a protein.
          Length = 1174

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -3

Query: 231 RMLPVASHAGACGALRSTRAAVALCGPGAGTCA 133
           RM P    A   GAL+   A V++CG GA  CA
Sbjct: 829 RMAP-DQKAQLIGALQEIGAKVSMCGDGANDCA 860


>U41552-6|AAU05561.1| 1203|Caenorhabditis elegans Hypothetical
           protein K07E3.7b protein.
          Length = 1203

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -3

Query: 231 RMLPVASHAGACGALRSTRAAVALCGPGAGTCA 133
           RM P    A   GAL+   A V++CG GA  CA
Sbjct: 858 RMAP-DQKAQLIGALQEIGAKVSMCGDGANDCA 889


>AF022980-5|AAG24192.1|  328|Caenorhabditis elegans Serpentine
           receptor, class j protein45 protein.
          Length = 328

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 408 RITIAAKYSSTRFSREEYRVMLVQNHVPECLA-APDAVAW 524
           ++T+     ++RF  E  R ++VQ  +P C++ +P  + W
Sbjct: 227 KMTVRTSQKTSRFQFELLRALIVQTVIPICISFSPCLLCW 266


>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical protein
            ZK1067.2 protein.
          Length = 2219

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
 Frame = +2

Query: 461  PCNA-CAESCAGMSCGAGRR 517
            PC A C   C   SCGAG R
Sbjct: 1810 PCKAFCTNKCEHQSCGAGER 1829


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,042,840
Number of Sequences: 27780
Number of extensions: 197782
Number of successful extensions: 708
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)