Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0779
(564 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30599| Best HMM Match : Ald_Xan_dh_C (HMM E-Value=7.7e-35) 85 5e-17
SB_68| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_53911| Best HMM Match : Ald_Xan_dh_C2 (HMM E-Value=0) 56 2e-08
SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42) 52 4e-07
SB_27644| Best HMM Match : Ald_Xan_dh_C (HMM E-Value=3.1e-26) 50 2e-06
SB_46667| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.65
SB_10579| Best HMM Match : Extensin_2 (HMM E-Value=0.28) 31 0.86
SB_41888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_31957| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_20304| Best HMM Match : Vicilin_N (HMM E-Value=4.6) 28 4.6
SB_49646| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_24153| Best HMM Match : I_LWEQ (HMM E-Value=0.44) 28 6.1
SB_47545| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_39334| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_27097| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
>SB_30599| Best HMM Match : Ald_Xan_dh_C (HMM E-Value=7.7e-35)
Length = 255
Score = 84.6 bits (200), Expect = 5e-17
Identities = 58/171 (33%), Positives = 84/171 (49%)
Frame = +3
Query: 27 QCSGEVKYACDVYTGPRTVHVAFVLSDVCLGEIEGFDESEALKLQGVVGFYTAKDIPGKN 206
Q SGE +Y D+ ++ AFVL+ +I D + A L GVV F +A IP +
Sbjct: 88 QASGEAQYTNDIPAQNGELYAAFVLASQGNCKIASIDATIAKALPGVVEFMSASSIPQQG 147
Query: 207 VFTPSDVPWQDFAEEILASKKISYYGQPVALIAATTHRLVLTAANLVRVKYKKSNAVPVL 386
V + +P + EEI S ++ + GQ + LI A + R AA V+V Y K A P+L
Sbjct: 148 V--NNFMPTPNDPEEIFCSGEVLFAGQAIGLILADSQRHADKAAEAVKVVY-KDIATPIL 204
Query: 387 SIQEALVAADKEQRVRQEVAIKATSKGSDTRHVIKGSFSMPSQYHYTMETQ 539
SI+ A+ A + A HVI G +M +Q+H+ METQ
Sbjct: 205 SIKAAIAAKSFFPAIAPMTVGDAEGAIKAASHVISGEIAMDTQHHFHMETQ 255
>SB_68| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 66.9 bits (156), Expect = 1e-11
Identities = 46/128 (35%), Positives = 67/128 (52%)
Frame = +3
Query: 27 QCSGEVKYACDVYTGPRTVHVAFVLSDVCLGEIEGFDESEALKLQGVVGFYTAKDIPGKN 206
Q SGE +Y D+ ++ AFVL+ +I D + A L GVV F +A IP +
Sbjct: 251 QASGEAQYTNDIPAQNGELYAAFVLASQGNCKIASIDATIAKALPGVVEFMSASSIPQQG 310
Query: 207 VFTPSDVPWQDFAEEILASKKISYYGQPVALIAATTHRLVLTAANLVRVKYKKSNAVPVL 386
V + +P + EEI S ++ + GQ + LI A + R AA V+V Y K A P+L
Sbjct: 311 V--NNFMPTPNDPEEIFCSGEVLFAGQAIGLILADSQRHADKAAEAVKVVY-KDIATPIL 367
Query: 387 SIQEALVA 410
SI+ A+ A
Sbjct: 368 SIKAAIAA 375
>SB_53911| Best HMM Match : Ald_Xan_dh_C2 (HMM E-Value=0)
Length = 817
Score = 56.4 bits (130), Expect = 2e-08
Identities = 43/143 (30%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Frame = +3
Query: 135 DESEALKLQGVVGFYTAKDIPGKNVFTPSDVPWQDFAEEILASKKISYYGQPVALIAATT 314
D SEA+K+ GV F +A D+PG N P +P E + + +++ GQ + + A T
Sbjct: 60 DASEAVKMPGVQAFVSADDVPGCNKSGPV-IP----DELVFYNHEVTSTGQAIGAVVAET 114
Query: 315 HRLVLTAANLVRVKYKKSNAVPVLSIQEALVA-ADKEQRVRQEVA-IKATSKGSDTRHVI 488
AA V+++Y+ + +L+I++A+ A + + ++ E ++A + SD HVI
Sbjct: 115 QAQAQRAAKAVKIEYE--DLPRILTIEDAIAANSFIDPPLKMENGDLEAGFRASD--HVI 170
Query: 489 KGSFSMPSQYHYTMETQSCTVAV 557
+G +Q H+ +ET + T+AV
Sbjct: 171 EGEMRTGAQEHFYLETHA-TIAV 192
>SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42)
Length = 1644
Score = 51.6 bits (118), Expect = 4e-07
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +3
Query: 249 EILASKKISYYGQPVALIAATTHRLVLTAANLVRVKYKKSNAVPVLSIQEALVAADK-EQ 425
+I K + Y G + LI A T AA V ++Y + P+LSI++A+ A E
Sbjct: 1277 QIFCEKDVLYVGHVIGLIVADTQLHADEAAEKVNIEYLDAKP-PILSIKDAIEAKSFIEL 1335
Query: 426 RVRQEVAIKATSKG-SDTRHVIKGSFSMPSQYHYTMETQ 539
R +++A+ T + HV+ G S +Q+H+ METQ
Sbjct: 1336 RYIRDIAVGDTEAAMKSSSHVVTGEVSCGAQHHFHMETQ 1374
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 90 AFVLSDVCLGEIEGFDESEALKLQGVVGFYTAKDIPGKNV 209
AFV S V E+ G + +K+ GVV F++A DIP V
Sbjct: 1196 AFVTSTVVC-ELYGAFVTSTVKMPGVVRFFSAADIPANGV 1234
>SB_27644| Best HMM Match : Ald_Xan_dh_C (HMM E-Value=3.1e-26)
Length = 274
Score = 49.6 bits (113), Expect = 2e-06
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Frame = +3
Query: 81 VHVAFVLSDVCLGEIEGFDESEALKLQGVVGFYTAKDIPG-KNVFTPSDVPWQDFAEEIL 257
++VA VLSD +I D S+A+ + GV FY+A D+ N F D EE+
Sbjct: 34 LYVARVLSDRPHAKILSVDASKAVAVHGVYAFYSAADLASVDNNFGLLD------KEELF 87
Query: 258 ASKKISYYGQPVALIAATTHRLVLTAANLVRVKYKKSNAVPVLSIQEAL 404
A+ ++ + GQ + ++AA + +AA LV+V Y+ A V +I++A+
Sbjct: 88 ATDEVVFVGQTIGVVAADCKGVADSAAKLVKVTYEDMPA--VFTIEDAI 134
>SB_46667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1295
Score = 31.1 bits (67), Expect = 0.65
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 87 VAFVLSDVC--LGEIEGFDESEALKLQGVVGFYTAKDIPGKNVFT 215
VA + DVC L E+EG D+++ QG+V T +I GK + T
Sbjct: 1004 VALTIDDVCKQLAELEGLDQNQISSYQGIV---TENNINGKVLAT 1045
>SB_10579| Best HMM Match : Extensin_2 (HMM E-Value=0.28)
Length = 815
Score = 30.7 bits (66), Expect = 0.86
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 87 VAFVLSDVC--LGEIEGFDESEALKLQGVVGFYTAKDIPGKNVFT 215
VA + DVC L E+EG D+ + QG+V T +I GK + T
Sbjct: 250 VALTIDDVCKQLAELEGLDQKQISSYQGIV---TENNINGKVLAT 291
>SB_41888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1419
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 285 QPVALIAATTHRLVLTAANLVRVKYKKSNAVPVLSIQEAL 404
+ ++L A+TT +V T ANL+ V V S+QE+L
Sbjct: 1156 EELSLWASTTRDMVETQANLIEAGSADQTVVDVKSVQESL 1195
>SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1221
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = +1
Query: 448 SKRPAKARIPDTL*RVVSRCRPSTTTRWRLSPVPSPSR 561
SKRP IP VS+ RP+ R L P PSPSR
Sbjct: 1006 SKRPLTIDIP-----TVSKARPAPKKRKILPPPPSPSR 1038
>SB_31957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +3
Query: 213 TPSDVPWQDFAEEILASKKISYYGQPVA 296
T S + W+D +++I A ++I Y+ +P+A
Sbjct: 193 TCSVLTWKDISQDIRAEREIKYFDRPMA 220
>SB_20304| Best HMM Match : Vicilin_N (HMM E-Value=4.6)
Length = 261
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 136 TNPRR*NSKAWSDSTPP--KTYPARTSSHRQTCRGKTSLKRS 255
T+P+ +W ST KT P + + + GKTSLKRS
Sbjct: 48 TSPKTGRKTSWKTSTKTGRKTSPKTSLNASRKTSGKTSLKRS 89
>SB_49646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 624
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 378 PVLSIQEALVAADKEQRVRQEVAIKATSKGSDTRHVIKGS 497
PVL I+ A V DK+ RVR + I S+ DT +K S
Sbjct: 224 PVLRIKTAHVT-DKDNRVRSVLIIDNISQAPDTPATLKSS 262
>SB_24153| Best HMM Match : I_LWEQ (HMM E-Value=0.44)
Length = 563
Score = 27.9 bits (59), Expect = 6.1
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +3
Query: 303 AATTHRLVLTAANLVRVKYKKSNAVPVLSIQEALVAADKEQRV-RQEVAIKATSKGSDTR 479
A+T H + + A R KYK +L+ + A A Q+ R+ V A K + T
Sbjct: 446 ASTAHGKLASTARGNRQKYKGKTVTILLAEKPARTARGNRQKYKRKTVTSTAHGKTASTA 505
Query: 480 HVIKGSFSMPSQYHYTMETQSCT 548
H S + ++ Y +T + T
Sbjct: 506 HGKLASTARGNRQKYKRKTVTST 528
>SB_47545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 406
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 411 ADKEQRVRQEVAIKATSKGSDTRHVIKGSFSMPSQYHY 524
A+KE+ RQ+ K S G+DT H I+G + ++ Y
Sbjct: 265 ANKEE-TRQQQYNKNQSSGTDTNHGIRGRNKIQDRWRY 301
>SB_39334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = -3
Query: 172 PTTPWSFNASDSSKPSISPRHTSDNTKATWTVLGPVYTSHAYFTSPEH 29
PT P + N ++ S S + K TW V+G V T +H
Sbjct: 19 PTDPRTRNDTEESPKSTPRNYGGAGGKGTWGVIGEVLTEEDLKVRDQH 66
>SB_27097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 452 SDQQRLGYPTRYKG*FLDAVPVPLHDGDSV 541
S QR+ + + KG + DA+P HD D +
Sbjct: 210 SASQRVEFSRKKKGSYTDAIPSSTHDNDGM 239
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,818,849
Number of Sequences: 59808
Number of extensions: 363720
Number of successful extensions: 1052
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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