Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0776
(587 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase... 158 1e-38
AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase... 158 1e-38
AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase... 158 1e-38
AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase... 158 1e-38
AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase... 158 1e-38
Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase p... 156 6e-38
AL831891-1|CAD38567.1| 160|Homo sapiens hypothetical protein pr... 155 1e-37
AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase pro... 155 1e-37
AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase... 154 3e-37
BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein. 153 3e-37
BC048971-1|AAH48971.1| 134|Homo sapiens SCD5 protein protein. 149 1e-35
AL139819-3|CAH72823.1| 242|Homo sapiens stearoyl-CoA desaturase... 45 2e-04
S70284-1|AAB30631.1| 237|Homo sapiens stearoyl-CoA desaturase p... 40 0.009
BC000961-1|AAH00961.1| 323|Homo sapiens degenerative spermatocy... 31 3.0
AY423730-1|AAS00493.1| 323|Homo sapiens migration-inducing gene... 31 3.0
AF466375-1|AAM12531.1| 323|Homo sapiens sphingolipid delta 4 de... 31 3.0
AF002668-1|AAB62238.1| 323|Homo sapiens MLD protein. 31 3.0
D79991-1|BAA11486.1| 1745|Homo sapiens KIAA0169 protein protein. 30 5.3
BX537774-1|CAD97835.1| 1639|Homo sapiens hypothetical protein pr... 30 5.3
BC111045-1|AAI11046.1| 974|Homo sapiens NUP188 protein protein. 30 5.3
BC040352-1|AAH40352.1| 1293|Homo sapiens NUP188 protein protein. 30 5.3
AL672142-10|CAI10845.1| 1749|Homo sapiens nucleoporin 188kDa pro... 30 5.3
AL592211-4|CAI12368.1| 1749|Homo sapiens nucleoporin 188kDa prot... 30 5.3
>BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 158 bits (384), Expect = 1e-38
Identities = 77/149 (51%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Frame = +2
Query: 5 LLRFQKKYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAH 181
L+ FQ++Y P + +CFI+PTL P YFWGE+ N+ + T LRY LN T+LVNSAAH
Sbjct: 210 LVMFQRRYYKPGLLLMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAH 269
Query: 182 LWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFA 361
L+GY+PYDK++ ++ + + GEGFHNYHH FP+DY A E +IN TT FID A
Sbjct: 270 LFGYRPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMA 328
Query: 362 WMGWAYDLKTASTNIIEKRALRTGDGTYK 448
+G AYD K S I R RTGDG YK
Sbjct: 329 ALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 158 bits (384), Expect = 1e-38
Identities = 77/149 (51%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Frame = +2
Query: 5 LLRFQKKYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAH 181
L+ FQ++Y P + +CFI+PTL P YFWGE+ N+ + T LRY LN T+LVNSAAH
Sbjct: 210 LVMFQRRYYKPGLLMMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAH 269
Query: 182 LWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFA 361
L+GY+PYDK++ ++ + + GEGFHNYHH FP+DY A E +IN TT FID A
Sbjct: 270 LFGYRPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMA 328
Query: 362 WMGWAYDLKTASTNIIEKRALRTGDGTYK 448
+G AYD K S I R RTGDG YK
Sbjct: 329 ALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 158 bits (384), Expect = 1e-38
Identities = 77/149 (51%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Frame = +2
Query: 5 LLRFQKKYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAH 181
L+ FQ++Y P + +CFI+PTL P YFWGE+ N+ + T LRY LN T+LVNSAAH
Sbjct: 210 LVMFQRRYYKPGLLLMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAH 269
Query: 182 LWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFA 361
L+GY+PYDK++ ++ + + GEGFHNYHH FP+DY A E +IN TT FID A
Sbjct: 270 LFGYRPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMA 328
Query: 362 WMGWAYDLKTASTNIIEKRALRTGDGTYK 448
+G AYD K S I R RTGDG YK
Sbjct: 329 ALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 366
Score = 158 bits (384), Expect = 1e-38
Identities = 77/149 (51%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Frame = +2
Query: 5 LLRFQKKYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAH 181
L+ FQ++Y P + +CFI+PTL P YFWGE+ N+ + T LRY LN T+LVNSAAH
Sbjct: 217 LVMFQRRYYKPGLLLMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAH 276
Query: 182 LWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFA 361
L+GY+PYDK++ ++ + + GEGFHNYHH FP+DY A E +IN TT FID A
Sbjct: 277 LFGYRPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMA 335
Query: 362 WMGWAYDLKTASTNIIEKRALRTGDGTYK 448
+G AYD K S I R RTGDG YK
Sbjct: 336 ALGLAYDRKKVSKAAILARIKRTGDGNYK 364
>AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 158 bits (384), Expect = 1e-38
Identities = 77/149 (51%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Frame = +2
Query: 5 LLRFQKKYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAH 181
L+ FQ++Y P + +CFI+PTL P YFWGE+ N+ + T LRY LN T+LVNSAAH
Sbjct: 210 LVMFQRRYYKPGLLLMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAH 269
Query: 182 LWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFA 361
L+GY+PYDK++ ++ + + GEGFHNYHH FP+DY A E +IN TT FID A
Sbjct: 270 LFGYRPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMA 328
Query: 362 WMGWAYDLKTASTNIIEKRALRTGDGTYK 448
+G AYD K S I R RTGDG YK
Sbjct: 329 ALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase
protein.
Length = 359
Score = 156 bits (378), Expect = 6e-38
Identities = 75/149 (50%), Positives = 97/149 (65%), Gaps = 1/149 (0%)
Frame = +2
Query: 5 LLRFQKKYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAH 181
L+ FQ++Y P + +CFI+PTL P YFWGE+ N+ + T LRY LN T+LVNSAAH
Sbjct: 210 LVMFQRRYYKPGLLMMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAH 269
Query: 182 LWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFA 361
L+GY+PYDK++ ++ + + GEGFHNYHH FP+DY A E +IN T FID+ A
Sbjct: 270 LFGYRPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFNTFFIDWMA 328
Query: 362 WMGWAYDLKTASTNIIEKRALRTGDGTYK 448
+G YD K S I R RTGDG YK
Sbjct: 329 ALGLTYDRKKVSKAAILARIKRTGDGNYK 357
>AL831891-1|CAD38567.1| 160|Homo sapiens hypothetical protein
protein.
Length = 160
Score = 155 bits (375), Expect = 1e-37
Identities = 72/147 (48%), Positives = 98/147 (66%), Gaps = 1/147 (0%)
Frame = +2
Query: 5 LLRFQKKYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAH 181
++R Q+KY + +CF++PTL P Y WGESL N++ + ++LRY SLN ++LVNSAAH
Sbjct: 14 VVRIQRKYYKISVVLMCFVVPTLVPWYIWGESLWNSYFLASILRYTISLNISWLVNSAAH 73
Query: 182 LWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFA 361
++G +PYDK + Q+ + GEGFHNYHH FP+DY A E G + N TT FIDF
Sbjct: 74 MYGNRPYDKHISPRQNPLVALGAIGEGFHNYHHTFPFDYSASEFGLNF-NPTTWFIDFMC 132
Query: 362 WMGWAYDLKTASTNIIEKRALRTGDGT 442
W+G A D K A+ +IE R RTGD +
Sbjct: 133 WLGLATDRKRATKPMIEARKARTGDSS 159
>AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase
protein.
Length = 330
Score = 155 bits (375), Expect = 1e-37
Identities = 72/147 (48%), Positives = 98/147 (66%), Gaps = 1/147 (0%)
Frame = +2
Query: 5 LLRFQKKYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAH 181
++R Q+KY + +CF++PTL P Y WGESL N++ + ++LRY SLN ++LVNSAAH
Sbjct: 184 VVRIQRKYYKISVVLMCFVVPTLVPWYIWGESLWNSYFLASILRYTISLNISWLVNSAAH 243
Query: 182 LWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFA 361
++G +PYDK + Q+ + GEGFHNYHH FP+DY A E G + N TT FIDF
Sbjct: 244 MYGNRPYDKHISPRQNPLVALGAIGEGFHNYHHTFPFDYSASEFGLNF-NPTTWFIDFMC 302
Query: 362 WMGWAYDLKTASTNIIEKRALRTGDGT 442
W+G A D K A+ +IE R RTGD +
Sbjct: 303 WLGLATDRKRATKPMIEARKARTGDSS 329
>AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 359
Score = 154 bits (373), Expect = 3e-37
Identities = 76/149 (51%), Positives = 97/149 (65%), Gaps = 1/149 (0%)
Frame = +2
Query: 5 LLRFQKKYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAH 181
L+ FQ++Y P + +CFI+PTL P YFWGE+ N+ + T LRY LN T+LVNSAA
Sbjct: 210 LVMFQRRYYKPGLLMMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAL 269
Query: 182 LWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFA 361
L+GY+PYDK++ ++ + + GEGFHNYHH FP+DY A E +IN TT FID A
Sbjct: 270 LFGYRPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMA 328
Query: 362 WMGWAYDLKTASTNIIEKRALRTGDGTYK 448
+G AYD K S I R RTGDG YK
Sbjct: 329 ALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein.
Length = 355
Score = 153 bits (372), Expect = 3e-37
Identities = 75/146 (51%), Positives = 96/146 (65%), Gaps = 1/146 (0%)
Frame = +2
Query: 5 LLRFQKKYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAH 181
L+ FQ++Y P + +CFI+PTL P YFWGE+ N+ + T LRY LN T+LVNSAAH
Sbjct: 210 LVMFQRRYYKPGLLMMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAH 269
Query: 182 LWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFA 361
L+GY+PYDK++ ++ + + GEGFHNYHH FP+DY A E +IN TT FID A
Sbjct: 270 LFGYRPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMA 328
Query: 362 WMGWAYDLKTASTNIIEKRALRTGDG 439
+G AYD K S I R RTGDG
Sbjct: 329 ALGLAYDRKKVSKAAILARIKRTGDG 354
>BC048971-1|AAH48971.1| 134|Homo sapiens SCD5 protein protein.
Length = 134
Score = 149 bits (360), Expect = 1e-35
Identities = 68/132 (51%), Positives = 90/132 (68%), Gaps = 1/132 (0%)
Frame = +2
Query: 50 ICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKATQ 226
+CF++PTL P Y WGESL N++ + ++LRY SLN ++LVNSAAH++G +PYDK + Q
Sbjct: 3 MCFVVPTLVPWYIWGESLWNSYFLASILRYTISLNISWLVNSAAHMYGNRPYDKHISPRQ 62
Query: 227 SGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNI 406
+ + GEGFHNYHH FP+DY A E G + N TT FIDF W+G A D K A+ +
Sbjct: 63 NPLVALGAIGEGFHNYHHTFPFDYSASEFGLNF-NPTTWFIDFMCWLGLATDRKRATKPM 121
Query: 407 IEKRALRTGDGT 442
IE R RTGD +
Sbjct: 122 IEARKARTGDSS 133
>AL139819-3|CAH72823.1| 242|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 242
Score = 45.2 bits (102), Expect = 2e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2
Query: 5 LLRFQKKYAIPFIGTICFIIPTLAPMYFWGES 100
L+ FQ++Y P + +CFI+PTL P YFWGE+
Sbjct: 210 LVMFQRRYYKPGLLMMCFILPTLVPWYFWGET 241
>S70284-1|AAB30631.1| 237|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 237
Score = 39.5 bits (88), Expect = 0.009
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 5 LLRFQKKYAIPFIGTICFIIPTLAPMYFWG 94
L+ FQ++Y P + +CFI+PTL P Y WG
Sbjct: 208 LVMFQRRYYKPGLLMMCFILPTLVPWYCWG 237
>BC000961-1|AAH00961.1| 323|Homo sapiens degenerative spermatocyte
homolog 1, lipid desaturase (Drosophila) protein.
Length = 323
Score = 31.1 bits (67), Expect = 3.0
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 146 LNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFP 289
++G F+ L G++ Y + G N TF G+HN HH FP
Sbjct: 225 ISGHFIAEHYMFLKGHETY------SYYGPLNLLTFNVGYHNEHHDFP 266
>AY423730-1|AAS00493.1| 323|Homo sapiens migration-inducing gene 15
protein protein.
Length = 323
Score = 31.1 bits (67), Expect = 3.0
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 146 LNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFP 289
++G F+ L G++ Y + G N TF G+HN HH FP
Sbjct: 225 ISGHFIAEHYMFLKGHETY------SYYGPLNLLTFNVGYHNEHHDFP 266
>AF466375-1|AAM12531.1| 323|Homo sapiens sphingolipid delta 4
desaturase protein DES1 protein.
Length = 323
Score = 31.1 bits (67), Expect = 3.0
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 146 LNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFP 289
++G F+ L G++ Y + G N TF G+HN HH FP
Sbjct: 225 ISGHFIAEHYMFLKGHETY------SYYGPLNLLTFNVGYHNEHHDFP 266
>AF002668-1|AAB62238.1| 323|Homo sapiens MLD protein.
Length = 323
Score = 31.1 bits (67), Expect = 3.0
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 146 LNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFP 289
++G F+ L G++ Y + G N TF G+HN HH FP
Sbjct: 225 ISGHFIAEHYMFLKGHETY------SYYGPLNLLTFNVGYHNEHHDFP 266
>D79991-1|BAA11486.1| 1745|Homo sapiens KIAA0169 protein protein.
Length = 1745
Score = 30.3 bits (65), Expect = 5.3
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 442 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 579
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1543 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1588
>BX537774-1|CAD97835.1| 1639|Homo sapiens hypothetical protein
protein.
Length = 1639
Score = 30.3 bits (65), Expect = 5.3
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 442 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 579
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1437 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1482
>BC111045-1|AAI11046.1| 974|Homo sapiens NUP188 protein protein.
Length = 974
Score = 30.3 bits (65), Expect = 5.3
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 442 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 579
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 772 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 817
>BC040352-1|AAH40352.1| 1293|Homo sapiens NUP188 protein protein.
Length = 1293
Score = 30.3 bits (65), Expect = 5.3
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 442 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 579
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1091 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1136
>AL672142-10|CAI10845.1| 1749|Homo sapiens nucleoporin 188kDa protein.
Length = 1749
Score = 30.3 bits (65), Expect = 5.3
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 442 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 579
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1547 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1592
>AL592211-4|CAI12368.1| 1749|Homo sapiens nucleoporin 188kDa protein.
Length = 1749
Score = 30.3 bits (65), Expect = 5.3
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 442 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 579
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1547 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1592
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,204,482
Number of Sequences: 237096
Number of extensions: 1830636
Number of successful extensions: 2717
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2695
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -