Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0771
         (631 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0284 - 14595643-14595663,14595978-14596018,14596379-145967...    28   5.3  

>01_03_0284 - 14595643-14595663,14595978-14596018,14596379-14596732,
            14597023-14597494,14597524-14600001
          Length = 1121

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +3

Query: 477  FLVYAPILGIIKIDLLSMLPCVSVCVKAELHSLSGRRRHYCTQQLFLCP 623
            FL  APIL I+K++  S     SV V   + SLS  +   C  +  L P
Sbjct: 865  FLPKAPILRILKLEENSPHLSQSVLVSGYMSSLSQIKLSICADEAILLP 913


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,167,504
Number of Sequences: 37544
Number of extensions: 218645
Number of successful extensions: 434
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)