Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0770
         (448 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.3  
SB_7579| Best HMM Match : HEAT (HMM E-Value=0.0096)                    29   2.3  
SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.1  
SB_23807| Best HMM Match : DUF885 (HMM E-Value=6.6e-16)                27   9.3  
SB_36159| Best HMM Match : Peptidase_M28 (HMM E-Value=0)               27   9.3  

>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 766

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
 Frame = +1

Query: 118 VMANWPALG----SIILPNVGGWANGLFFAGQIRKDNSEKSWYDELKKPSWTPP 267
           ++ NWP       S+++P +  W      +G+       + W  + K+P W PP
Sbjct: 397 ILINWPFQQEYRTSLLIPRIF-WVKDSHMSGECGLGALSRDWVYDRKRPRWRPP 449


>SB_7579| Best HMM Match : HEAT (HMM E-Value=0.0096)
          Length = 1276

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
 Frame = +3

Query: 264 PKVGIWSSLDCSLQQH-GICLLPH--LGGM*WFY*RCSPTSHIVRSTAATQLVLDSYFLR 434
           P+  + S+LD  +  H  + LLP   L  + W + RCS       S   ++ +L+SY L 
Sbjct: 721 PEKAMLSALDTFITLHRNLSLLPRPILKNLLWLFARCSFLHKARPSLTTSETILESYVLA 780

Query: 435 IE 440
           ++
Sbjct: 781 LK 782


>SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1220

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
 Frame = +1

Query: 178  NGLFFAGQIRK--DNSEKSWYDELKKPSW 258
            NG+F+  +I K  +++   W++E+KK SW
Sbjct: 1181 NGIFYNPKIAKLKESNPIRWWNEIKKLSW 1209


>SB_23807| Best HMM Match : DUF885 (HMM E-Value=6.6e-16)
          Length = 879

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = -2

Query: 282 TKYPLWGSPAWLL*LI--IPGLFTVVFTDLTRKEQSIGPS-TDIWEDNRTECR 133
           T  P W  P  +L  I  I GL  ++     RK +  GP  +   ED+R ECR
Sbjct: 28  TSRPRWLVPLVILACIAIITGL-ALIIVGAVRKPECAGPKGSSTGEDSREECR 79


>SB_36159| Best HMM Match : Peptidase_M28 (HMM E-Value=0)
          Length = 771

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 193 AGQIRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSMGY 318
           A  + K  SE  +  EL + +   P WVF  +W  +Y S  Y
Sbjct: 731 AHYLNKPWSETPFLSELLRQT---PDWVFSISWVNIYQSWAY 769


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,370,514
Number of Sequences: 59808
Number of extensions: 332304
Number of successful extensions: 727
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 883875528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)