Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0769
         (476 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075400-1|AAL68230.1|  810|Drosophila melanogaster LD29741p pro...    29   4.3  
AY058390-1|AAL13619.1|  640|Drosophila melanogaster GH15748p pro...    29   4.3  
AE014134-3028|AAF53750.1|  810|Drosophila melanogaster CG10492-P...    29   4.3  

>AY075400-1|AAL68230.1|  810|Drosophila melanogaster LD29741p
           protein.
          Length = 810

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = -1

Query: 260 NYISHPHH--YKR*SMQMNLNMEING 189
           NY   PHH  YK+   QMNL   +NG
Sbjct: 525 NYQPKPHHFSYKQQQQQMNLQQRLNG 550


>AY058390-1|AAL13619.1|  640|Drosophila melanogaster GH15748p
           protein.
          Length = 640

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = -1

Query: 260 NYISHPHH--YKR*SMQMNLNMEING 189
           NY   PHH  YK+   QMNL   +NG
Sbjct: 355 NYQPKPHHFSYKQQQQQMNLQQRLNG 380


>AE014134-3028|AAF53750.1|  810|Drosophila melanogaster CG10492-PA
           protein.
          Length = 810

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = -1

Query: 260 NYISHPHH--YKR*SMQMNLNMEING 189
           NY   PHH  YK+   QMNL   +NG
Sbjct: 525 NYQPKPHHFSYKQQQQQMNLQQRLNG 550


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,994,589
Number of Sequences: 53049
Number of extensions: 298660
Number of successful extensions: 418
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)