Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0769
         (476 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   2.9  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   3.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   3.9  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    22   3.9  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   6.8  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 423 FNKYKNLNRVW*SYNFNWTIS 361
           + K+KN  RVW +    W IS
Sbjct: 294 YAKHKNNRRVWLTILLVWAIS 314


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 291 VLSASFLIYFQLYISSTSLQKIIYANEF 208
           +LSAS+L+ + +++    L  IIY+  F
Sbjct: 211 LLSASYLVCYGIWVYFVPLFLIIYSYWF 238


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 150 RQITKMTFDI*EIERLR 100
           RQ+ ++ FDI ++ER R
Sbjct: 298 RQVDELNFDIQDLERWR 314


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 291 VLSASFLIYFQLYISSTSLQKIIYANEF 208
           +LSAS+L+ + +++    L  IIY+  F
Sbjct: 87  LLSASYLVCYGIWVYFVPLFLIIYSYWF 114


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = -3

Query: 408 NLNRVW*SYNFNWTISNGTTYSNI*TEMSEKLRESSMYRVLSASFLIYFQLYIS-STSLQ 232
           N NR+    N      N  T   I T +  K R S    +L   F + ++  ++ S  +Q
Sbjct: 329 NENRLLDRRNIEVVAKNKETLQAI-TGLKVKRRISF---ILVHGFPLEYEYVLAVSNRIQ 384

Query: 231 KIIYANEFKYGNQRI 187
           K+IY  +F   N RI
Sbjct: 385 KVIYGFDFNDVNFRI 399


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,172
Number of Sequences: 438
Number of extensions: 2477
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)