Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0768
(528 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0285 - 14604499-14604608,14604692-14605203,14605339-146054... 31 0.76
08_01_0652 + 5627226-5628395,5628885-5629040,5629115-5629304,562... 29 1.7
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 29 1.7
09_02_0286 - 6898041-6898144,6898881-6899005,6899158-6899207,689... 29 3.1
08_01_0653 + 5633673-5634821,5635730-5635885,5635942-5636152,563... 29 3.1
12_02_1197 + 26915933-26916298 28 4.0
05_07_0257 + 28719980-28720220,28721412-28721455,28722521-287225... 28 4.0
07_01_1203 - 11464142-11464324,11464422-11464484,11464685-114665... 28 5.3
06_03_0968 - 26402154-26403834,26404322-26404383,26404473-264046... 27 7.1
03_03_0022 - 13834090-13834128,13835217-13835282,13835364-138354... 27 7.1
01_05_0005 - 16886553-16886946,16887079-16887404 27 7.1
05_01_0281 + 2186500-2187435,2187518-2187616,2187707-2187772,218... 27 9.3
03_05_0167 - 21448714-21448846,21449748-21449870,21450024-214503... 27 9.3
>01_03_0285 -
14604499-14604608,14604692-14605203,14605339-14605418,
14605597-14605699,14605759-14605907,14606088-14606180,
14606289-14606675,14607690-14608124,14608198-14608311,
14608405-14608453,14608684-14608843,14608941-14609499
Length = 916
Score = 30.7 bits (66), Expect = 0.76
Identities = 29/119 (24%), Positives = 42/119 (35%), Gaps = 1/119 (0%)
Frame = +1
Query: 67 DSMATITMKPEYPPSEVYSTSEPPPGLSAQGVNF-GPDREDCSTNSGRFLLHLGNLYIGF 243
D + IT+ + + G S G F G S+ SG+ L + G
Sbjct: 51 DELVEITLDVQRDSVAIQEVRGVDEGGSGHGTGFDGLPLVSPSSKSGKLTSKLRQVTNGL 110
Query: 244 ELGSSSFIMPSARAAGCNARQRTRFGRQSLRK*CPGSG*AFATSKCPRFAWSTAHAVFS 420
++ SSS PS +A R R R R G F T+K W+ F+
Sbjct: 111 KMKSSSRKAPSPQAQQSAKRVRKRLDRTKSSAAVALKGLQFVTAKVGNDGWAAVEKRFN 169
>08_01_0652 +
5627226-5628395,5628885-5629040,5629115-5629304,
5629590-5629729
Length = 551
Score = 29.5 bits (63), Expect = 1.7
Identities = 26/99 (26%), Positives = 42/99 (42%)
Frame = +2
Query: 53 ENTSQTRWLQ*L*SRNIRLLKYTAHQNRHRAYRHRVSTSVQIAKIAALTVVASSFILGTF 232
+N W++ +RN R + T H+ +HR S + KI L+ V ++
Sbjct: 128 DNDDANAWIRTAINRNARFIHLTGHRTEIGVLKHRALVSTHL-KILKLSYV----LIDDK 182
Query: 233 ILASSWVAARSSCHQLEQLDAMLDKELALEGRAYGNDAL 349
IL S C LE+LD K+ A+ G + +L
Sbjct: 183 ILKQ----LSSGCKSLEELDL---KDCAMTGHEISSASL 214
>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 362 PLPLANAHA-LHGVPPMLSSVLPETSQPSSSRPSLFKDDALN 484
P P A +H H P +L+S+LP PSSS PSL +LN
Sbjct: 2522 PSPYATSHGNQHQRPSILASLLPFVL-PSSSNPSLTAPLSLN 2562
>09_02_0286 - 6898041-6898144,6898881-6899005,6899158-6899207,
6899245-6899386,6899951-6900020,6900077-6900216,
6900291-6900365,6901083-6904723
Length = 1448
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -1
Query: 123 AVYF-RRRIFRLHSYCSHRVWLVFSFPSRPNTVYQNL 16
AV+F R++ RLH +CSH V+++ ++V++ L
Sbjct: 1233 AVHFPNRKMRRLHEFCSHSVFVIILPAWEISSVFETL 1269
>08_01_0653 +
5633673-5634821,5635730-5635885,5635942-5636152,
5636488-5636624
Length = 550
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 53 ENTSQTRWLQ*L*SRNIRLLKYTAHQNRHRAYRHR--VSTSVQIAKIAALTV 202
+N W++ RN R + T H+ +HR VST ++I K++ + +
Sbjct: 122 DNDDANAWIRTAIKRNARFIHLTGHRKEIGVLKHRALVSTHLKILKLSYVLI 173
>12_02_1197 + 26915933-26916298
Length = 121
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 137 GGSDVLYTSEGGYSGFIVIVAIESGW 60
GG DVL + GG +++VA ES W
Sbjct: 3 GGEDVLVVAPGGGRDALLLVAQESAW 28
>05_07_0257 +
28719980-28720220,28721412-28721455,28722521-28722590,
28722693-28722816,28723420-28724060,28725100-28725364,
28725434-28725713,28726042-28726209,28726867-28727358,
28727432-28727689
Length = 860
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +2
Query: 356 DEPLPLANAHALHGVPPMLSSVLPE---TSQPSSSRPSLFKDDALNHAESKINED 511
+E P +N ++ +PP +PE T +P SS ++KD+ +S N+D
Sbjct: 265 NEVSPASNDSSIDVLPPREGLEVPESVATVKPGSSTADVYKDEVEEDMDSDKNKD 319
>07_01_1203 -
11464142-11464324,11464422-11464484,11464685-11466515,
11467240-11468036
Length = 957
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 181 EDCSTNSGRFLLHLGNL 231
EDC G FL HLGNL
Sbjct: 574 EDCDITGGYFLKHLGNL 590
>06_03_0968 -
26402154-26403834,26404322-26404383,26404473-26404682,
26404776-26404860,26405461-26405618,26405745-26405868,
26405955-26406123,26406202-26406287,26406379-26406467,
26406564-26406735,26407820-26408193
Length = 1069
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 408 CCLQCYLRRASRHLHDPVSSKTTHSTMPS 494
C LQC+++RAS +H P + K S +P+
Sbjct: 252 CELQCHIQRASESMH-PFAPKNILSHLPN 279
>03_03_0022 -
13834090-13834128,13835217-13835282,13835364-13835461,
13836340-13836493,13836742-13836798,13836906-13837028
Length = 178
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 429 RRASRHLHDPVSSKTTHSTMPSP 497
RR + LHD SS ++HS++P P
Sbjct: 9 RRWAVELHDASSSSSSHSSIPDP 31
>01_05_0005 - 16886553-16886946,16887079-16887404
Length = 239
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 70 SMATITMKPEYPPSEVYSTSEPPPGLSAQGVNFGPDREDCSTNSGRFL 213
+++ IT+ P P + + S PPP L V D DC + G+++
Sbjct: 17 ALSIITLVPRMPSPQSFFRS-PPPRLINSRVPHPSDASDCIFSDGKWV 63
>05_01_0281 +
2186500-2187435,2187518-2187616,2187707-2187772,
2187850-2188266
Length = 505
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 58 HQPDSMA-TITMKPEYPPSEVYSTSEPPPGLSA 153
H+ D+ A T T+ PPSE + PPP +A
Sbjct: 244 HRLDTAAATATVAQRLPPSEARAPDAPPPAATA 276
>03_05_0167 -
21448714-21448846,21449748-21449870,21450024-21450302,
21450389-21450672,21450737-21450964,21452937-21453110,
21453198-21453732,21453779-21453840,21453908-21454231,
21454664-21455093,21457033-21457268,21457355-21457414,
21457495-21457628,21457884-21458010,21458239-21458337,
21458414-21458513,21458601-21458671,21459101-21459172,
21459656-21459787,21460512-21460670
Length = 1253
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 275 QLEQLDAMLDKELALEGRAYGNDALVADE 361
++EQ++ L +++ E YGN LV DE
Sbjct: 127 RVEQMEFRLKEDILQEASRYGNKILVTDE 155
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,141,244
Number of Sequences: 37544
Number of extensions: 359316
Number of successful extensions: 1320
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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