Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0768
         (528 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08387-1|CAA69667.1|  453|Homo sapiens mu-adaptin-related protei...    31   3.3  
BC018705-1|AAH18705.1|  453|Homo sapiens AP4M1 protein protein.        31   3.3  
AF020796-1|AAD25869.1|  453|Homo sapiens mu-adaptin-related prot...    31   3.3  
BC133012-1|AAI33013.1|  135|Homo sapiens FLJ40142 protein protein.     30   5.8  
BC133010-1|AAI33011.1|  135|Homo sapiens FLJ40142 protein protein.     30   5.8  
AK097461-1|BAC05063.1|  135|Homo sapiens protein ( Homo sapiens ...    30   5.8  

>Y08387-1|CAA69667.1|  453|Homo sapiens mu-adaptin-related protein 2
           protein.
          Length = 453

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = +1

Query: 94  PEYPPSEVYSTSEPPPGLSAQGVNFGPDREDCSTNSGRFL 213
           P  PPS   STS  P GL    ++F   R  CS    RFL
Sbjct: 385 PPGPPSHGLSTSASPLGLGPASLSFELPRHTCSGLQVRFL 424


>BC018705-1|AAH18705.1|  453|Homo sapiens AP4M1 protein protein.
          Length = 453

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = +1

Query: 94  PEYPPSEVYSTSEPPPGLSAQGVNFGPDREDCSTNSGRFL 213
           P  PPS   STS  P GL    ++F   R  CS    RFL
Sbjct: 385 PPGPPSHGLSTSASPLGLGPASLSFELPRHTCSGLQVRFL 424


>AF020796-1|AAD25869.1|  453|Homo sapiens mu-adaptin-related protein
           2 protein.
          Length = 453

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = +1

Query: 94  PEYPPSEVYSTSEPPPGLSAQGVNFGPDREDCSTNSGRFL 213
           P  PPS   STS  P GL    ++F   R  CS    RFL
Sbjct: 385 PPGPPSHGLSTSASPLGLGPASLSFELPRHTCSGLQVRFL 424


>BC133012-1|AAI33013.1|  135|Homo sapiens FLJ40142 protein protein.
          Length = 135

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 381 PTLCMEYRPCCLQCYLRRASRHLHDPVSS 467
           P  C++   CCL C L +ASR +H  V S
Sbjct: 31  PDGCVQSWRCCLPCDLGQASRFIHTTVCS 59


>BC133010-1|AAI33011.1|  135|Homo sapiens FLJ40142 protein protein.
          Length = 135

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 381 PTLCMEYRPCCLQCYLRRASRHLHDPVSS 467
           P  C++   CCL C L +ASR +H  V S
Sbjct: 31  PDGCVQSWRCCLPCDLGQASRFIHTTVCS 59


>AK097461-1|BAC05063.1|  135|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40142 fis, clone TESTI2012922. ).
          Length = 135

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 381 PTLCMEYRPCCLQCYLRRASRHLHDPVSS 467
           P  C++   CCL C L +ASR +H  V S
Sbjct: 31  PDGCVQSWRCCLPCDLGQASRFIHTTVCS 59


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,816,371
Number of Sequences: 237096
Number of extensions: 1890719
Number of successful extensions: 13234
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13229
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)