Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0768
(528 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG ... 33 0.12
At3g62010.1 68416.m06964 expressed protein 31 0.48
At1g01440.1 68414.m00059 extra-large G-protein-related weak simi... 31 0.48
At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1 ... 31 0.63
At2g11620.1 68415.m01249 hypothetical protein 29 1.9
At1g27430.1 68414.m03343 GYF domain-containing protein contains ... 29 1.9
At2g30020.1 68415.m03652 protein phosphatase 2C, putative / PP2C... 28 3.4
At4g19170.1 68417.m02829 9-cis-epoxycarotenoid dioxygenase, puta... 28 4.5
At4g12080.1 68417.m01920 DNA-binding family protein contains a A... 28 4.5
At5g40070.1 68418.m04861 hypothetical protein contains similarit... 27 5.9
At5g46870.1 68418.m05775 RNA recognition motif (RRM)-containing ... 27 7.8
At5g15210.1 68418.m01782 zinc finger homeobox family protein / Z... 27 7.8
At3g45800.1 68416.m04957 hypothetical protein 27 7.8
At3g45770.2 68416.m04947 oxidoreductase, zinc-binding dehydrogen... 27 7.8
At3g45770.1 68416.m04948 oxidoreductase, zinc-binding dehydrogen... 27 7.8
At2g14770.2 68415.m01669 Ulp1 protease family protein similar to... 27 7.8
At2g14770.1 68415.m01668 Ulp1 protease family protein similar to... 27 7.8
At2g06210.2 68415.m00683 phosphoprotein-related low similarity t... 27 7.8
At2g06210.1 68415.m00684 phosphoprotein-related low similarity t... 27 7.8
At1g65480.1 68414.m07429 flowering locus T protein (FT) identica... 27 7.8
At1g28010.1 68414.m03430 multidrug resistance P-glycoprotein, pu... 27 7.8
At1g27940.1 68414.m03423 multidrug resistance P-glycoprotein, pu... 27 7.8
>At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG
binding domain-containing protein contains Pfam profiles
PF00628: PHD-finger (2 copies), PF01429: Methyl-CpG
binding domain
Length = 2176
Score = 33.1 bits (72), Expect = 0.12
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = +2
Query: 122 AHQNRHRAYRHRVSTSVQIAKIAALTVVASSFILGTFILASSWV-AARSSCHQLEQLDAM 298
+H NR RA+R V +S I ++ T+V I ++ W ++ S+ ++ L A+
Sbjct: 2054 SHPNRRRAWRVFVKSSQSIYELVQATIVVEDMIKTEYLKNEWWYWSSLSAAAKISTLSAL 2113
Query: 299 LDKELALEGRAYGNDALVADEPLPLANAHALHGVPPMLSSVLP-ETSQPSS 448
+ +L+ A++ D+P+ +N + P++S LP + SQP S
Sbjct: 2114 SVRIFSLDA------AIIYDKPITPSN--PIDETKPIIS--LPDQKSQPVS 2154
>At3g62010.1 68416.m06964 expressed protein
Length = 1254
Score = 31.1 bits (67), Expect = 0.48
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 275 QLEQLDAMLDKELALEGRAYGNDALVADE 361
++EQ++A L +++ +E YGN LV DE
Sbjct: 124 RVEQMEARLKEDILMEASRYGNKILVTDE 152
>At1g01440.1 68414.m00059 extra-large G-protein-related weak
similarity to extra-large G-protein (AtXLG1)
(GI:3201682) [Arabidopsis thaliana]
Length = 664
Score = 31.1 bits (67), Expect = 0.48
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +2
Query: 278 LEQLDAMLDKELALEGRAYGNDALVADEPLPLANAHALHGVPPMLSSVLPE 430
L +LD++ D L R GN+A V D+P P+ HA HG PP + PE
Sbjct: 89 LRKLDSIKDHLL----RGGGNNATVVDQP-PMG-FHAHHGPPPSYYNPYPE 133
>At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1
like protein identical to SP|Q9S7R5 TWIN SISTER of FT
protein (TFL1 like protein) {Arabidopsis thaliana};
contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 30.7 bits (66), Expect = 0.63
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 227 TFILASSWVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPLPLANAHAL 391
T ++ V + S+ HQ E L ++ A G A+GN+ + + P P + H +
Sbjct: 66 TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRI 120
>At2g11620.1 68415.m01249 hypothetical protein
Length = 491
Score = 29.1 bits (62), Expect = 1.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 67 DSMATITMKPEYPPSEVYSTSEPPP 141
+ M + MKPE PP ++Y +P P
Sbjct: 261 NGMQGVLMKPEKPPQDLYGQCQPQP 285
>At1g27430.1 68414.m03343 GYF domain-containing protein contains Pfam
profile: PF02213 GYF domain
Length = 1531
Score = 29.1 bits (62), Expect = 1.9
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -1
Query: 474 SSLKRLGREDDGWLVSGNTED 412
S ++RLG + + W+V G+T+D
Sbjct: 1148 SEIRRLGEDPNSWMVGGSTDD 1168
>At2g30020.1 68415.m03652 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase 2C
(GI:4587992){Arabidopsis thaliana}
Length = 396
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/82 (23%), Positives = 34/82 (41%)
Frame = +1
Query: 64 PDSMATITMKPEYPPSEVYSTSEPPPGLSAQGVNFGPDREDCSTNSGRFLLHLGNLYIGF 243
P S +T P+ P + +PP G + ++FG + S+ G L +
Sbjct: 48 PSSPSTTVSSPKSPFRLRFQ--KPPSGFAPGPLSFGSESVSASSPPGGVLKRKRPTRLDI 105
Query: 244 ELGSSSFIMPSARAAGCNARQR 309
+G + F+ P + +A A R
Sbjct: 106 PIGVAGFVAPISSSAAVAATPR 127
>At4g19170.1 68417.m02829 9-cis-epoxycarotenoid dioxygenase,
putative / neoxanthin cleavage enzyme, putative /
carotenoid cleavage dioxygenase, putative similar to
9-cis-epoxycarotenoid dioxygenase [Phaseolus
vulgaris][GI:6715257]; neoxanthin cleavage enzyme,
Lycopersicon esculentum, PATX:E325797
Length = 595
Score = 27.9 bits (59), Expect = 4.5
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 197 TVVASSFILGTFILASSWVAARSSCHQLEQLD-AMLDKELALEGRAYGNDALVADEPLPL 373
+V +SSF+ TF L S + RSS L +++ A++++ + + ND + L
Sbjct: 3 SVSSSSFLSSTFSLHHSLLRRRSSSPTLLRINSAVVEERSPITNPSDNNDRRNKPKTLHN 62
Query: 374 ANAHALHGVPPML 412
H L PP L
Sbjct: 63 RTNHTLVSSPPKL 75
>At4g12080.1 68417.m01920 DNA-binding family protein contains a AT
hook motif (DNA binding motifs with a preference for A/T
rich regions), Pfam:PF02178
Length = 356
Score = 27.9 bits (59), Expect = 4.5
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 236 LASSWVAARSSCHQLEQLDAMLDKELALEGRAYGNDA-LVADEPLPLANAHALHGVPPML 412
L S V ++ +E + L K+ R YG D +VA P P+++A A +PP
Sbjct: 66 LQISTVTTTTTTAAMEGISGGLMKKKRGRPRKYGPDGTVVALSPKPISSAPAPSHLPPPS 125
Query: 413 SSVLPETSQPSSSR 454
S V+ ++ S+
Sbjct: 126 SHVIDFSASEKRSK 139
>At5g40070.1 68418.m04861 hypothetical protein contains similarity
to hypothetical proteins of [Arabidopsis thaliana]
Length = 157
Score = 27.5 bits (58), Expect = 5.9
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +2
Query: 368 PLANAHALHGVPPMLSSVLPETSQPSSSRPSLFKDDALNHAESKINE 508
PLA+ ++ + ++ S+ P S+ S PS F NH ++ +++
Sbjct: 81 PLADHYSPDQISQLIQSLEPHVSKTQSLNPSQFSLFMYNHGDNTLSQ 127
>At5g46870.1 68418.m05775 RNA recognition motif (RRM)-containing
protein similar to unknown protein (pir||C71447)
Length = 295
Score = 27.1 bits (57), Expect = 7.8
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +1
Query: 67 DSMATITMKPEY--PPSEVYSTSEPPPGLSAQGVNFGPDREDCSTNSGRFLLHLGNLYIG 240
DS T+TM P+Y PP + S L + P RED S + G + G
Sbjct: 68 DSSVTVTMSPDYQLPPDALASIE----SLKESNKSSSPTREDVSVFRKAEDVVSGMISKG 123
Query: 241 FELGSSS 261
F LG +
Sbjct: 124 FVLGKDA 130
>At5g15210.1 68418.m01782 zinc finger homeobox family protein /
ZF-HD homeobox family protein various predicted
proteins, Arabidopsis thaliana
Length = 271
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 49 KREHQPDSMATITMKPEYPPSEVYSTSEPPPGLSAQGVNFGPDREDCST 195
+RE P S++ I E+ P + PPP A G+ PD +D ++
Sbjct: 105 RREEDPSSLSAIVPAIEFRPHNRHQLPPPPPPHLA-GIR-SPDDDDSAS 151
>At3g45800.1 68416.m04957 hypothetical protein
Length = 563
Score = 27.1 bits (57), Expect = 7.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 88 MKPEYPPSEVYSTSEPPP 141
MKPE PP ++Y +P P
Sbjct: 458 MKPEKPPQDLYGQCQPQP 475
>At3g45770.2 68416.m04947 oxidoreductase, zinc-binding dehydrogenase
family protein similar to nuclear receptor binding
factor-1 NRBF-1 - Rattus norvegicus, EMBL:AB015724;
contains Pfam zinc-binding dehydrogenase domain PF00107
Length = 297
Score = 27.1 bits (57), Expect = 7.8
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +2
Query: 194 LTVVASSFILGTFILASSWVAARSSCHQLEQLDAMLDKELAL--EGRAYGNDALVADEPL 367
+TV +SFI L W+ + S ++++ M+D L L +G+ LV E
Sbjct: 217 ITVSTTSFIFKDLALRGFWLQSWLSMGKVKECREMIDYLLGLARDGKLKYETELVPFEEF 276
Query: 368 PLANAHAL 391
P+A AL
Sbjct: 277 PVALDKAL 284
>At3g45770.1 68416.m04948 oxidoreductase, zinc-binding dehydrogenase
family protein similar to nuclear receptor binding
factor-1 NRBF-1 - Rattus norvegicus, EMBL:AB015724;
contains Pfam zinc-binding dehydrogenase domain PF00107
Length = 375
Score = 27.1 bits (57), Expect = 7.8
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +2
Query: 194 LTVVASSFILGTFILASSWVAARSSCHQLEQLDAMLDKELAL--EGRAYGNDALVADEPL 367
+TV +SFI L W+ + S ++++ M+D L L +G+ LV E
Sbjct: 295 ITVSTTSFIFKDLALRGFWLQSWLSMGKVKECREMIDYLLGLARDGKLKYETELVPFEEF 354
Query: 368 PLANAHAL 391
P+A AL
Sbjct: 355 PVALDKAL 362
>At2g14770.2 68415.m01669 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1158
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +3
Query: 213 PSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPT---EMMPW*RMSLC 368
P +W+ +W+ +G L I+ + T+ S KA T EMMP+ ++C
Sbjct: 1055 PMNWKSEHWVALGINLNERLITVYDALISHTRESAVKARMTPICEMMPYLDRAMC 1109
>At2g14770.1 68415.m01668 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1139
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +3
Query: 213 PSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPT---EMMPW*RMSLC 368
P +W+ +W+ +G L I+ + T+ S KA T EMMP+ ++C
Sbjct: 1036 PMNWKSEHWVALGINLNERLITVYDALISHTRESAVKARMTPICEMMPYLDRAMC 1090
>At2g06210.2 68415.m00683 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 852
Score = 27.1 bits (57), Expect = 7.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 517 QFVFVYFGLGMVECVVFEETGS 452
+FVF YFGLG V+ + E GS
Sbjct: 102 EFVFPYFGLGQVQLKLGELKGS 123
>At2g06210.1 68415.m00684 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 1064
Score = 27.1 bits (57), Expect = 7.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 517 QFVFVYFGLGMVECVVFEETGS 452
+FVF YFGLG V+ + E GS
Sbjct: 314 EFVFPYFGLGQVQLKLGELKGS 335
>At1g65480.1 68414.m07429 flowering locus T protein (FT) identical
to SP|Q9SXZ2 FLOWERING LOCUS T protein {Arabidopsis
thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 227 TFILASSWVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPLPLANAH 385
T ++ V + S+ H E L ++ A G +GN+ + + P P A H
Sbjct: 66 TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIH 118
>At1g28010.1 68414.m03430 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]
Length = 1247
Score = 27.1 bits (57), Expect = 7.8
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -1
Query: 57 FSFPSRPNTVYQNL 16
F++PSRPN V++NL
Sbjct: 380 FAYPSRPNMVFENL 393
>At1g27940.1 68414.m03423 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein atpgp1
GI:3849833 from [Arabidopsis thaliana]
Length = 1245
Score = 27.1 bits (57), Expect = 7.8
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -1
Query: 57 FSFPSRPNTVYQNL 16
F++PSRPN V++NL
Sbjct: 379 FAYPSRPNMVFENL 392
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,297,367
Number of Sequences: 28952
Number of extensions: 260271
Number of successful extensions: 1076
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 977150592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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