Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0766
         (484 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.9  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -3

Query: 431  VRRVFGY*RPPVFLGGILEVDHDQPVVGSIL 339
            +  ++G     VF+G +L++  D P+  S L
Sbjct: 949  ISAIYGLIMMAVFVGVMLQISQDGPLAPSSL 979


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -3

Query: 431  VRRVFGY*RPPVFLGGILEVDHDQPVVGSIL 339
            +  ++G     VF+G +L++  D P+  S L
Sbjct: 949  ISAIYGLIMMAVFVGVMLQISQDGPLAPSSL 979


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = +3

Query: 381 NPAKENWRTLVPEHPTDVLDWAAAVDQDKLVIH 479
           NP  + +   +  H   +LDW      DK + H
Sbjct: 202 NPHAKLYDYDLSSHVITILDWTKEDGTDKFMSH 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,690
Number of Sequences: 336
Number of extensions: 1877
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)