Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0766
         (484 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66498-3|CAA91293.2|  687|Caenorhabditis elegans Hypothetical pr...    31   0.44 
U58761-4|AAB00715.1|  631|Caenorhabditis elegans Hypothetical pr...    29   2.3  
AC024800-5|AAF60724.1|  966|Caenorhabditis elegans Hypothetical ...    28   3.1  
Z81567-3|CAB04587.1|  301|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z72506-3|CAA96617.1|  310|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z83316-1|CAB05896.1|  212|Caenorhabditis elegans Hypothetical pr...    27   7.1  
Z70755-2|CAA94785.1|  220|Caenorhabditis elegans Hypothetical pr...    27   7.1  
Z70780-4|CAD54137.2|  786|Caenorhabditis elegans Hypothetical pr...    27   9.4  
AL132943-6|CAC14393.1|  511|Caenorhabditis elegans Hypothetical ...    27   9.4  

>Z66498-3|CAA91293.2|  687|Caenorhabditis elegans Hypothetical
           protein M195.3 protein.
          Length = 687

 Score = 31.1 bits (67), Expect = 0.44
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +1

Query: 205 AVLRRPQQAPGKSTGSCRSCQSSRNSKPITSTSRMRILYASS 330
           A +  P++ PG ST S  S ++S    P +STSR  I   SS
Sbjct: 588 AAVLPPEERPGPSTNSNVSIEASVEKSPSSSTSRRSISIRSS 629


>U58761-4|AAB00715.1|  631|Caenorhabditis elegans Hypothetical
           protein C01F1.3a protein.
          Length = 631

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = +3

Query: 300 VTNEDSVCIIRTNKNAPNYRLIMIDLQNPA 389
           + N D+  +  + +N+P Y+L++ D++N A
Sbjct: 41  ILNSDTQNVAESVRNSPRYKLVLTDIKNEA 70


>AC024800-5|AAF60724.1|  966|Caenorhabditis elegans Hypothetical
           protein Y49F6A.1 protein.
          Length = 966

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = -3

Query: 155 NQTRRLR-FSTAVPQ-ETPQRQRLRTATCLSGDSRVSGR-DFTSVSDPSVL 12
           N+T  LR F   + + +T  +Q +R+ TCL G    +GR +F  +S  +++
Sbjct: 800 NKTSHLRVFPVEIREGDTAMKQNVRSGTCLDGKITSAGREEFVLISQTALI 850


>Z81567-3|CAB04587.1|  301|Caenorhabditis elegans Hypothetical
           protein K08C9.4 protein.
          Length = 301

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = -3

Query: 395 FLGGILEVDHDQPVVGSILVRADDAYRILIRDVLVIGFEFLDDWHERQLPVD 240
           FL G L       ++GS+++       +L  D+  + F+ +DD HE +L  D
Sbjct: 4   FLAGTLSAISGIVILGSLVIAG-----VLFNDINTLYFDVMDDMHEFKLLAD 50


>Z72506-3|CAA96617.1|  310|Caenorhabditis elegans Hypothetical
           protein F07A5.2 protein.
          Length = 310

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = +1

Query: 190 QPRQPAVLRRPQQAPGKSTGSCRSCQSSRNSKPITSTSRMRILYASSARTRML 348
           +PR  + L R   +    TGS RS  S R+    TS +R +I  + SAR R+L
Sbjct: 63  RPRIKSKLPRSSSSGFSGTGSERSISSKRSKIGNTSGNRNKI--SQSARRRLL 113


>Z83316-1|CAB05896.1|  212|Caenorhabditis elegans Hypothetical
           protein B0379.1 protein.
          Length = 212

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +3

Query: 264 PVVEEFEADYEYVTNEDSVCIIRTNKNAPNYRLIMIDLQNPAKENW 401
           P +  F   + Y +   S+CI +TN+ A  Y L      NP +  W
Sbjct: 63  PYLGSFRERHNYTSIAPSLCINKTNR-AIEYDLAPHKAYNPRQSEW 107


>Z70755-2|CAA94785.1|  220|Caenorhabditis elegans Hypothetical
           protein K06A4.2 protein.
          Length = 220

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = -3

Query: 467 FILVYGGRPIQHVRRVFGY*RPPVFLGGILEVDHDQPV 354
           F++V+  R ++   ++ GY RPP+ +  +   D+D+ V
Sbjct: 178 FLIVHTTRRLRCYEQLHGYARPPIIVLTVKNDDNDESV 215


>Z70780-4|CAD54137.2|  786|Caenorhabditis elegans Hypothetical
           protein F46B6.5b protein.
          Length = 786

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -3

Query: 173 RASTGRNQTRRLRFSTAVPQETPQRQRLRTATCLSGDSRVSGRDFTSVSDPS 18
           R S GR+Q+R LR+ ++  Q  P  ++ R         R    D  S+S  S
Sbjct: 432 RRSGGRSQSRSLRYGSSPQQSRPVEEQKRHRDTEKERERDHESDRESISSTS 483


>AL132943-6|CAC14393.1|  511|Caenorhabditis elegans Hypothetical
           protein Y116F11B.11 protein.
          Length = 511

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = -1

Query: 118 LRKLHNDNVFGLRRVYPVIAEFL--VVTSLQFPIRPSCRS 5
           LR L+ D+V  ++++ P+++EFL  + T  + P + S +S
Sbjct: 302 LRSLNKDSVQNIQQIPPIVSEFLKELATVKEIPKKMSEKS 341


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,209,697
Number of Sequences: 27780
Number of extensions: 184523
Number of successful extensions: 598
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)