Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0765
         (553 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5Z889 Cluster: Sensor protein; n=1; Eubacterium ventri...    40   0.038
UniRef50_A0CCD3 Cluster: Chromosome undetermined scaffold_167, w...    32   7.7  

>UniRef50_A5Z889 Cluster: Sensor protein; n=1; Eubacterium
           ventriosum ATCC 27560|Rep: Sensor protein - Eubacterium
           ventriosum ATCC 27560
          Length = 476

 Score = 39.9 bits (89), Expect = 0.038
 Identities = 19/45 (42%), Positives = 30/45 (66%)
 Frame = -2

Query: 162 PKESRGSSAVRE*TIYIIIFSNLNDLNSYSFFLDDQNKKNIDFIE 28
           P    G+ A +  ++Y+ I SNLN+LN+Y++ L  QNK+ I+F E
Sbjct: 211 PNNEIGNLAEQLKSMYLKISSNLNELNNYNYLLKTQNKELIEFDE 255


>UniRef50_A0CCD3 Cluster: Chromosome undetermined scaffold_167,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_167,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 214

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = -2

Query: 192 PLYSLNYLFNPKESRGSSAVRE*TIYIIIFSNLNDLNSYSFFL 64
           P YS N+ FN K S+ S   +  TIYI+       LN YS F+
Sbjct: 171 PSYSYNFFFNSKISKYSYLEKFSTIYILQTQLCCKLNFYSIFI 213


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,595,295
Number of Sequences: 1657284
Number of extensions: 9670091
Number of successful extensions: 17819
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17815
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)