Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0765
         (553 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    24   1.0  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   9.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.5  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 405 QLY*HEFFVFIVCAKYVTFIEQNRTELKEAHE 310
           +L  +   VF+V   Y+ FIE ++ E+  + E
Sbjct: 92  ELLGYSVVVFVVVMGYIGFIEWDKVEIVRSQE 123


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 45  FFYSGRPEKTNNYLNHSN 98
           ++Y+     + NY+NH N
Sbjct: 359 YYYNKNHPNSENYINHQN 376


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 45  FFYSGRPEKTNNYLNHSN 98
           ++Y+     + NY+NH N
Sbjct: 307 YYYNKNHPNSENYINHQN 324


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +2

Query: 482 KFRGKYRYYFIFNCHIQ 532
           +F+     Y++F+CHI+
Sbjct: 591 RFKATNPGYWLFHCHIE 607


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 228 QQFCLGVLLYGNPLYSLNY 172
           +Q C+G LLY    +S ++
Sbjct: 125 EQLCIGGLLYNERTHSCDW 143


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 286  RIKLYVLKFVCFL*FGSILFYERNVFCTNNKYKKLM 393
            RIKL +   +  +  G I+F E    C+    KK++
Sbjct: 1149 RIKLVIKAIIIMILSGCIIFTEGIWICSLIHRKKIV 1184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,875
Number of Sequences: 336
Number of extensions: 2795
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)