Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0765
         (553 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_31215| Best HMM Match : Acid_phosphat_A (HMM E-Value=2.6e-26)       28   4.4  
SB_51848| Best HMM Match : DUF1135 (HMM E-Value=6.4e-09)               27   7.7  
SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   7.7  

>SB_31215| Best HMM Match : Acid_phosphat_A (HMM E-Value=2.6e-26)
          Length = 448

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 378 FIVCAKYVTFIEQNRTELKEAHE 310
           F VC KY+  + +N+T L E HE
Sbjct: 198 FDVCPKYIHQVSKNKTSLYEHHE 220


>SB_51848| Best HMM Match : DUF1135 (HMM E-Value=6.4e-09)
          Length = 498

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +2

Query: 119 IVYSRTALLPRDSFGLNR*FKEYRGFPYNNTPKQN-C*KGATNSL 250
           ++Y  TA+ P++S+ L         F  +++ K+N C  G TN L
Sbjct: 350 VIYGSTAVSPKESYILQFDANSSNSFTLSSSNKENLCSSGLTNRL 394


>SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 875

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -3

Query: 257 LLSMNLLRLFNNFV*EYYYTGIPYTL*TTCST 162
           +LS +     NNF    Y TG PYT  TTC+T
Sbjct: 380 ILSQDTQTPLNNF----YNTGYPYTQNTTCTT 407


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,764,513
Number of Sequences: 59808
Number of extensions: 294979
Number of successful extensions: 625
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)