Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0765
         (553 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g27570.1 68417.m03960 glycosyltransferase family protein cont...    28   3.6  
At4g27560.1 68417.m03959 glycosyltransferase family protein cont...    28   3.6  
At4g09500.2 68417.m01562 glycosyltransferase family protein cont...    27   6.3  
At4g09500.1 68417.m01561 glycosyltransferase family protein cont...    27   6.3  
At3g15430.2 68416.m01958 regulator of chromosome condensation (R...    27   6.3  
At3g15430.1 68416.m01957 regulator of chromosome condensation (R...    27   6.3  
At2g22930.1 68415.m02723 glycosyltransferase family protein cont...    27   8.3  
At1g75030.1 68414.m08715 pathogenesis-related thaumatin family p...    27   8.3  

>At4g27570.1 68417.m03960 glycosyltransferase family protein
           contains Pfam profile: PF00201 UDP-glucoronosyl and
           UDP-glucosyl transferase
          Length = 453

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -2

Query: 231 FQQFCLGVLLYGNPLYSLNYLFNPKESRGSSAVRE 127
           FQ+ CLG+ L G+P     +L   K  RGSS ++E
Sbjct: 275 FQELCLGMELTGSP-----FLVAVKPPRGSSTIQE 304


>At4g27560.1 68417.m03959 glycosyltransferase family protein
           contains Pfam profile: PF00201 UDP-glucoronosyl and
           UDP-glucosyl transferase
          Length = 455

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -2

Query: 231 FQQFCLGVLLYGNPLYSLNYLFNPKESRGSSAVRE 127
           FQ+ CLG+ L G+P     +L   K  RGSS ++E
Sbjct: 275 FQELCLGMELTGSP-----FLVAVKPPRGSSTIQE 304


>At4g09500.2 68417.m01562 glycosyltransferase family protein
           contains Pfam profile: PF00201 UDP-glucoronosyl and
           UDP-glucosyl transferase
          Length = 442

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -2

Query: 231 FQQFCLGVLLYGNPLYSLNYLFNPKESRGSSAVRE 127
           FQ+ CLG+ L G P     +L   K  RGSS V+E
Sbjct: 269 FQELCLGMELTGLP-----FLLAVKPPRGSSTVQE 298


>At4g09500.1 68417.m01561 glycosyltransferase family protein
           contains Pfam profile: PF00201 UDP-glucoronosyl and
           UDP-glucosyl transferase
          Length = 417

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -2

Query: 231 FQQFCLGVLLYGNPLYSLNYLFNPKESRGSSAVRE 127
           FQ+ CLG+ L G P     +L   K  RGSS V+E
Sbjct: 244 FQELCLGMELTGLP-----FLLAVKPPRGSSTVQE 273


>At3g15430.2 68416.m01958 regulator of chromosome condensation
           (RCC1) family protein low similarity to UVB-resistance
           protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
           Pfam profile PF00415: Regulator of chromosome
           condensation (RCC1)
          Length = 488

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 311 SCASFSSVRFCSMNVTYFAQTINTKNSC*YSCEFNIKR 424
           S A +++ + CSM+  Y    + T+     +CE N KR
Sbjct: 55  SLADYAASQLCSMHPVYVGMGLTTQKELFANCEGNWKR 92


>At3g15430.1 68416.m01957 regulator of chromosome condensation
           (RCC1) family protein low similarity to UVB-resistance
           protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
           Pfam profile PF00415: Regulator of chromosome
           condensation (RCC1)
          Length = 488

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 311 SCASFSSVRFCSMNVTYFAQTINTKNSC*YSCEFNIKR 424
           S A +++ + CSM+  Y    + T+     +CE N KR
Sbjct: 55  SLADYAASQLCSMHPVYVGMGLTTQKELFANCEGNWKR 92


>At2g22930.1 68415.m02723 glycosyltransferase family protein
           contains Pfam profile: PF00201 UDP-glucoronosyl and
           UDP-glucosyl transferase
          Length = 442

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -2

Query: 231 FQQFCLGVLLYGNPLYSLNYLFNPKESRGSSAVRE 127
           FQ+ CLG+ L G P     +L   K  RGSS V E
Sbjct: 269 FQELCLGMELTGLP-----FLIAVKPPRGSSTVEE 298


>At1g75030.1 68414.m08715 pathogenesis-related thaumatin family
           protein identical to thaumatin-like protein [Arabidopsis
           thaliana] GI:2435406; contains Pfam profile: PF00314
           Thaumatin family
          Length = 246

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 287 GSNYTC*SSCASFSSVRFCSMNVTYFAQT 373
           GS   C S+CA+FSS  FC        QT
Sbjct: 173 GSVAACKSACAAFSSPEFCCTGAHATPQT 201


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,056,510
Number of Sequences: 28952
Number of extensions: 208912
Number of successful extensions: 351
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 351
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)