Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0764
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   2.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.1  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   6.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   6.7  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   8.9  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.9  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -3

Query: 234 AELGSTTSPSFTLIDDTVPACDDLNFF 154
           A LG+T+S +F  +++  P C+  N +
Sbjct: 241 ATLGTTSSCTFDNLEELGPVCNSNNIW 267


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 149 LHHRPLNLCIK 117
           L+H+PLNL IK
Sbjct: 261 LNHKPLNLTIK 271


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 149 LHHRPLNLCIK 117
           L+H+PLNL IK
Sbjct: 153 LNHKPLNLTIK 163


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 183 VPACDDLNFFNSSPSPAK 130
           +  C++  F NS PS A+
Sbjct: 52  IEGCNETGFINSQPSMAE 69


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 183 VPACDDLNFFNSSPSPAK 130
           +  C++  F NS PS A+
Sbjct: 52  IEGCNETGFINSQPSMAE 69


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -1

Query: 482 CELMFDLNLPEVLI 441
           CEL   LNLPE  I
Sbjct: 102 CELAAQLNLPESTI 115


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 310 AEVCSTLRAHLHHHCWMAAF 251
           +E  + L  HL    W+A+F
Sbjct: 229 SEALARLERHLERKAWVASF 248


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 54  VKLGKVENKTRYCGNTRAKYYFY 122
           +++G +++    C N R  YYFY
Sbjct: 38  LQVGILDSLVFKCYNLRRIYYFY 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,035
Number of Sequences: 336
Number of extensions: 3540
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)