Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0764
         (656 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0474 + 18162538-18163731,18163800-18163855,18163951-181640...    36   0.037
02_05_1068 + 33862378-33863640                                         32   0.35 
09_02_0051 - 3606453-3606473,3606562-3606957,3608250-3608419,360...    30   1.9  
06_03_0775 - 24510624-24510655,24511228-24512179                       30   1.9  
05_06_0055 + 25235844-25235872,25237026-25237932                       29   3.3  
11_06_0134 + 20454405-20455121                                         27   9.9  

>11_04_0474 + 18162538-18163731,18163800-18163855,18163951-18164011,
            18164107-18165495,18166024-18166635,18166706-18166852,
            18166941-18167209,18167322-18167412,18167500-18167757,
            18168376-18168450,18168937-18168945
          Length = 1386

 Score = 35.5 bits (78), Expect = 0.037
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +2

Query: 554  GRWCHTRLRPRTQEFLESAAKNYELHICTFG 646
            G W  T+LRP    FLE A+K YELH+ T G
Sbjct: 1138 GMW--TKLRPGIWNFLEKASKLYELHLYTMG 1166


>02_05_1068 + 33862378-33863640
          Length = 420

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 569 TRLRPRTQEFLESAAKNYELHICTFGAR 652
           T+LRP   EFL  A+  +E+H+ T G R
Sbjct: 157 TKLRPFVHEFLREASAMFEMHVYTLGNR 184


>09_02_0051 -
           3606453-3606473,3606562-3606957,3608250-3608419,
           3609654-3610707
          Length = 546

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = -1

Query: 467 DLNLPEVLISCLSE---DAQHPLYLVFVPVLQTLLIQVQSVPLVQWPRPASWSPRCGGLL 297
           +L+  +  I C+ E   D ++P+ L+   V+Q    +      V+  +P S  PR  G +
Sbjct: 415 ELSALKAAIKCIEEHKLDEKYPIDLLQKRVIQLEKAKADKRRAVEAAKPQSKRPRANGSV 474

Query: 296 HTPRTS 279
           + P TS
Sbjct: 475 YAPHTS 480


>06_03_0775 - 24510624-24510655,24511228-24512179
          Length = 327

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +1

Query: 208 RRRSRT*FGCSRFGRMPPSNSDDGDVRGVWSRPPQRGDQEAGR--GHCTNGTLC 363
           RRRSR+    SR    P ++S  GD+ G  S  P +GD +      HC    LC
Sbjct: 69  RRRSRS---RSRSSSSPAASSGGGDIDGNLSSVPPKGDMDWWHVMDHCDGLLLC 119


>05_06_0055 + 25235844-25235872,25237026-25237932
          Length = 311

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = -2

Query: 325 LGLL-AAEVCSTLRAHLHHHCWMAAFF 248
           LGLL AA + +TL AH HHH   AA++
Sbjct: 193 LGLLNAATMPATLAAHHHHHHHAAAYY 219


>11_06_0134 + 20454405-20455121
          Length = 238

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 265 NSDDGDVRGVWSRPPQRGDQEAGRGHCTNGTL 360
           + ++G+  G W  P +R  ++AGRG    G L
Sbjct: 117 SGEEGEAAGCWPAP-EREKEKAGRGDAATGEL 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,903,504
Number of Sequences: 37544
Number of extensions: 409784
Number of successful extensions: 1257
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)