Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0764
(656 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063447-1|AAH63447.1| 867|Homo sapiens CTD (carboxy-terminal d... 117 3e-26
AF154115-1|AAD42088.1| 961|Homo sapiens RNA polymerase II CTD p... 117 3e-26
BC052576-1|AAH52576.1| 874|Homo sapiens CTDP1 protein protein. 113 5e-25
AF081287-1|AAC64549.1| 842|Homo sapiens serine phosphatase FCP1... 84 5e-16
AB037830-1|BAA92647.2| 2461|Homo sapiens KIAA1409 protein protein. 32 1.6
BC017800-1|AAH17800.1| 397|Homo sapiens Unknown (protein for IM... 31 2.7
BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein. 30 6.3
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 30 6.3
AY220790-1|AAO63590.1| 1312|Homo sapiens SIN3A-associated protei... 30 6.3
AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive dom... 30 6.3
AL391994-1|CAI13746.1| 927|Homo sapiens AT rich interactive dom... 30 6.3
AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive dom... 30 6.3
AL133418-1|CAI22958.1| 927|Homo sapiens AT rich interactive dom... 30 6.3
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 30 6.3
AF083249-1|AAD41239.1| 748|Homo sapiens Rb binding protein homo... 30 6.3
AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein ... 30 6.3
AB030181-1|BAA89794.1| 803|Homo sapiens RBP1-like protein protein. 30 6.3
Y00978-1|CAA68787.1| 615|Homo sapiens PDC-E2 precursor (AA -54 ... 30 8.3
>BC063447-1|AAH63447.1| 867|Homo sapiens CTD (carboxy-terminal
domain, RNA polymerase II, polypeptide A) phosphatase,
su protein.
Length = 867
Score = 117 bits (282), Expect = 3e-26
Identities = 69/173 (39%), Positives = 90/173 (52%), Gaps = 7/173 (4%)
Frame = +2
Query: 155 KKFKSSHAGTVSSIKVKEGDVVEPSSAVADLEECRHPTVMMEMCAECGADLRSEETKK-- 328
++ +S AG V + + G VV P + + LE C HP VM +CAECG DL ++K
Sbjct: 81 RRLRSERAGVVRELCAQPGQVVAPGAVLVRLEGCSHPVVMKGLCAECGQDLTQLQSKNGK 140
Query: 329 ----LDVAIVPMVHSVPELKVSEELAQKLGKEDAEXXXXXXXXXXXXXXXXXXXXXXNDN 496
L A V MVHSVPEL VS E A++LG+ED + +
Sbjct: 141 QQVPLSTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKLVLMVDLDQTLIHTTEQH 200
Query: 497 IPP-NLKGVLHFFLRGPGGPGRWCHTRLRPRTQEFLESAAKNYELHICTFGAR 652
+ KG+ HF L G G P HTRLRP ++FLE AK YELH+ TFG+R
Sbjct: 201 CQQMSNKGIFHFQL-GRGEP--MLHTRLRPHCKDFLEKIAKLYELHVFTFGSR 250
>AF154115-1|AAD42088.1| 961|Homo sapiens RNA polymerase II CTD
phosphatase protein.
Length = 961
Score = 117 bits (282), Expect = 3e-26
Identities = 69/173 (39%), Positives = 90/173 (52%), Gaps = 7/173 (4%)
Frame = +2
Query: 155 KKFKSSHAGTVSSIKVKEGDVVEPSSAVADLEECRHPTVMMEMCAECGADLRSEETKK-- 328
++ +S AG V + + G VV P + + LE C HP VM +CAECG DL ++K
Sbjct: 81 RRLRSERAGVVRELCAQPGQVVAPGAVLVRLEGCSHPVVMKGLCAECGQDLTQLQSKNGK 140
Query: 329 ----LDVAIVPMVHSVPELKVSEELAQKLGKEDAEXXXXXXXXXXXXXXXXXXXXXXNDN 496
L A V MVHSVPEL VS E A++LG+ED + +
Sbjct: 141 QQVPLSTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKLVLMVDLDQTLIHTTEQH 200
Query: 497 IPP-NLKGVLHFFLRGPGGPGRWCHTRLRPRTQEFLESAAKNYELHICTFGAR 652
+ KG+ HF L G G P HTRLRP ++FLE AK YELH+ TFG+R
Sbjct: 201 CQQMSNKGIFHFQL-GRGEP--MLHTRLRPHCKDFLEKIAKLYELHVFTFGSR 250
>BC052576-1|AAH52576.1| 874|Homo sapiens CTDP1 protein protein.
Length = 874
Score = 113 bits (272), Expect = 5e-25
Identities = 68/166 (40%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Frame = +2
Query: 176 AGTVSSIKVKEGDVVEPSSAVADLEECRHPTVMMEMCAECGADLRSEETKK------LDV 337
AG V + + G VV P + + LE C HP VM +CAECG DL ++K L
Sbjct: 1 AGVVRELCAQPGQVVAPGAVLVRLEGCSHPVVMKGLCAECGQDLTQLQSKNGKQQVPLST 60
Query: 338 AIVPMVHSVPELKVSEELAQKLGKEDAEXXXXXXXXXXXXXXXXXXXXXXNDNIPP-NLK 514
A V MVHSVPEL VS E A++LG+ED + + + K
Sbjct: 61 ATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNK 120
Query: 515 GVLHFFLRGPGGPGRWCHTRLRPRTQEFLESAAKNYELHICTFGAR 652
G+ HF L G G P HTRLRP ++FLE AK YELH+ TFG+R
Sbjct: 121 GIFHFQL-GRGEP--MLHTRLRPHCKDFLEKIAKLYELHVFTFGSR 163
>AF081287-1|AAC64549.1| 842|Homo sapiens serine phosphatase FCP1a
protein.
Length = 842
Score = 83.8 bits (198), Expect = 5e-16
Identities = 54/134 (40%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Frame = +2
Query: 272 MMEMCAECGADLRSEETKK------LDVAIVPMVHSVPELKVSEELAQKLGKEDAEXXXX 433
M +CAECG DL ++K L A V MVHSV EL VS E A++LG+ED +
Sbjct: 1 MKGLCAECGQDLTQLQSKNGKQQVPLSTATVSMVHSVAELMVSSEQAEQLGREDQQRLHR 60
Query: 434 XXXXXXXXXXXXXXXXXXNDNIPP-NLKGVLHFFLRGPGGPGRWCHTRLRPRTQEFLESA 610
+ + KG+ HF L G G P HTRLRP ++FLE
Sbjct: 61 NRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQL-GRGEP--MLHTRLRPHCKDFLEKI 117
Query: 611 AKNYELHICTFGAR 652
AK YELH+ TFG+R
Sbjct: 118 AKLYELHVFTFGSR 131
>AB037830-1|BAA92647.2| 2461|Homo sapiens KIAA1409 protein protein.
Length = 2461
Score = 32.3 bits (70), Expect = 1.6
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +2
Query: 263 PTVMMEMCAECGADLRSEETKKLDVAIVPM---VHSVPEL 373
PTVM + C +CGA L + + L +AIV + +H P+L
Sbjct: 1827 PTVMTDKCHDCGAILEEYDEETLGLAIVVLSTFIHLSPDL 1866
>BC017800-1|AAH17800.1| 397|Homo sapiens Unknown (protein for
IMAGE:4663973) protein.
Length = 397
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 293 CGADLRSEETKKLDVAIVPMVHSVPELKVSEELAQKLGKE 412
CG ++R +E K D + P +VP++K +++ KLGK+
Sbjct: 351 CGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLGKK 390
>BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein.
Length = 1153
Score = 30.3 bits (65), Expect = 6.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 293 CGADLRSEETKKLDVAIVPMVHSVPELKVSEELAQKLGKE 412
CG ++R +E K D + P +VP++K +++ KL KE
Sbjct: 609 CGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDKE 648
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 30.3 bits (65), Expect = 6.3
Identities = 21/81 (25%), Positives = 42/81 (51%)
Frame = -3
Query: 345 TMATSSFLVSSLRRSAPHSAHISIITVGWRHSSKSATAELGSTTSPSFTLIDDTVPACDD 166
++ +SS SS S+P S+H S + HSS S ++ +++ S + + P+ +
Sbjct: 49 SILSSSIPSSSSSSSSPSSSHSSS-SPSSSHSSSSPSSSSSTSSPSSSSSSSSSSPSSSN 107
Query: 165 LNFFNSSPSPAKSLYKNNTWP 103
+ +SS SP+ S +++ P
Sbjct: 108 SSSSSSSSSPSSSSSSSSSSP 128
>AY220790-1|AAO63590.1| 1312|Homo sapiens SIN3A-associated protein
180 protein.
Length = 1312
Score = 30.3 bits (65), Expect = 6.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 293 CGADLRSEETKKLDVAIVPMVHSVPELKVSEELAQKLGKE 412
CG ++R +E K D + P +VP++K +++ KL KE
Sbjct: 609 CGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDKE 648
>AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 30.3 bits (65), Expect = 6.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 293 CGADLRSEETKKLDVAIVPMVHSVPELKVSEELAQKLGKE 412
CG ++R +E K D + P +VP++K +++ KL KE
Sbjct: 607 CGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDKE 646
>AL391994-1|CAI13746.1| 927|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 927
Score = 30.3 bits (65), Expect = 6.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 293 CGADLRSEETKKLDVAIVPMVHSVPELKVSEELAQKLGKE 412
CG ++R +E K D + P +VP++K +++ KL KE
Sbjct: 414 CGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDKE 453
>AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 30.3 bits (65), Expect = 6.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 293 CGADLRSEETKKLDVAIVPMVHSVPELKVSEELAQKLGKE 412
CG ++R +E K D + P +VP++K +++ KL KE
Sbjct: 607 CGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDKE 646
>AL133418-1|CAI22958.1| 927|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 927
Score = 30.3 bits (65), Expect = 6.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 293 CGADLRSEETKKLDVAIVPMVHSVPELKVSEELAQKLGKE 412
CG ++R +E K D + P +VP++K +++ KL KE
Sbjct: 414 CGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDKE 453
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 30.3 bits (65), Expect = 6.3
Identities = 21/81 (25%), Positives = 40/81 (49%)
Frame = -3
Query: 345 TMATSSFLVSSLRRSAPHSAHISIITVGWRHSSKSATAELGSTTSPSFTLIDDTVPACDD 166
++ +SS SS S+P S+H S SS +++ S+ S S + + P+ +
Sbjct: 49 SILSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSN 108
Query: 165 LNFFNSSPSPAKSLYKNNTWP 103
+ +SS SP+ S +++ P
Sbjct: 109 SSSSSSSSSPSSSSSSSSSSP 129
>AF083249-1|AAD41239.1| 748|Homo sapiens Rb binding protein homolog
protein.
Length = 748
Score = 30.3 bits (65), Expect = 6.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 293 CGADLRSEETKKLDVAIVPMVHSVPELKVSEELAQKLGKE 412
CG ++R +E K D + P +VP++K +++ KL KE
Sbjct: 63 CGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDKE 102
>AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein
protein.
Length = 1325
Score = 30.3 bits (65), Expect = 6.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 293 CGADLRSEETKKLDVAIVPMVHSVPELKVSEELAQKLGKE 412
CG ++R +E K D + P +VP++K +++ KL KE
Sbjct: 622 CGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDKE 661
>AB030181-1|BAA89794.1| 803|Homo sapiens RBP1-like protein protein.
Length = 803
Score = 30.3 bits (65), Expect = 6.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 293 CGADLRSEETKKLDVAIVPMVHSVPELKVSEELAQKLGKE 412
CG ++R +E K D + P +VP++K +++ KL KE
Sbjct: 290 CGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDKE 329
>Y00978-1|CAA68787.1| 615|Homo sapiens PDC-E2 precursor (AA -54 to
561) protein.
Length = 615
Score = 29.9 bits (64), Expect = 8.3
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 176 AGTVSSIKVKEGDVVEPSSAVADLEECRHPTVMMEMCAEC--GADLRSEETKKLDV-AIV 346
AGT++ K KEGD + +A++E + TV E EC L +E T+ + + AI+
Sbjct: 73 AGTIARWKKKEGDKINEGDLIAEVETDK-ATVGFESLEECYMAKILVAEGTRDVPIGAII 131
Query: 347 PMVHSVPE 370
+ PE
Sbjct: 132 CITVGKPE 139
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,832,242
Number of Sequences: 237096
Number of extensions: 2395242
Number of successful extensions: 6855
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6844
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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