Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0764
         (656 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81532-3|CAC70088.2|  659|Caenorhabditis elegans Hypothetical pr...    83   1e-16
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    31   0.54 
Z92828-5|CAB07332.2|  586|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AF468834-1|AAL77082.1|  586|Caenorhabditis elegans PRY-1 protein.      29   3.8  
Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z73425-1|CAA97784.1|   97|Caenorhabditis elegans Hypothetical pr...    27   8.9  
U97007-1|AAB52291.1|  932|Caenorhabditis elegans Glutamate recep...    27   8.9  

>Z81532-3|CAC70088.2|  659|Caenorhabditis elegans Hypothetical
           protein F36F2.6 protein.
          Length = 659

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 58/178 (32%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
 Frame = +2

Query: 140 DGEELKKFKSSHAGTVSSIK-VKEGDVVEPSSAVADLEECRHPTVMMEMCAECGADLRSE 316
           +G+   K K+   G V+  K +K G V+     +A + EC H  V+ +MCA CG DLR +
Sbjct: 37  NGKVAGKIKTPCEGVVTFGKGLKPGIVLNKGQVIATVSECTHAIVIKDMCATCGKDLREK 96

Query: 317 -----ETKKLDVAIVPMVHSVPELKVSEELAQKLGKEDAEXXXXXXXXXXXXXXXXXXXX 481
                + K+   A V M+H VPEL VS+ LA+++G  D E                    
Sbjct: 97  GGRAGQRKEQSTANVSMIHHVPELIVSDTLAKEIGSAD-ENNLITNRKLVLLVDLDQTII 155

Query: 482 XXNDNIPPNLKGVLHFFLRGPGGPGRWCHTRLRPRTQEFLESAAKNYELHICTFGARQ 655
             +D  P  +    H  +       R   T+LRP T EFL   +  YE+HI T+G RQ
Sbjct: 156 HTSDK-PMTVDTENHKDITKYNLHSRVYTTKLRPHTTEFLNKMSNMYEMHIVTYGQRQ 212


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
           protein T19D12.1 protein.
          Length = 1844

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = -3

Query: 354 TIGTMATSSFLVSSLRRSAPHSAHISIITVGWRHSSKSATAELGSTTSPSFT 199
           T GT + ++    S+  +   ++  S+IT G   + +S+TA   +TTSPS T
Sbjct: 797 TTGTTSGAASTTGSITSTQQATSTSSVITTGSTSAPQSSTAVSSTTTSPSTT 848


>Z92828-5|CAB07332.2|  586|Caenorhabditis elegans Hypothetical
           protein C37A5.9 protein.
          Length = 586

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +2

Query: 197 KVKEGDVVEPSSAVADLEECRHPTVMMEMCAECGADL-RSEETKKLD 334
           KVK  D +E    + D+EECR+ T+ M    E   DL + +E ++LD
Sbjct: 293 KVKLNDEME--KRIDDIEECRYTTIDMVNGTEPNDDLGKIDEDEELD 337


>Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical
           protein B0395.2 protein.
          Length = 467

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = -2

Query: 322 GLLAAEVCSTLRAHLHHHCWMAAFFQICYSRTRFYYVSFFH 200
           G++   +C T   +   HCW+  F ++     R +Y++++H
Sbjct: 283 GIIPGIICMTSLFYGLLHCWLNCFSEMMQFADRQFYLNWWH 323


>AF468834-1|AAL77082.1|  586|Caenorhabditis elegans PRY-1 protein.
          Length = 586

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +2

Query: 197 KVKEGDVVEPSSAVADLEECRHPTVMMEMCAECGADL-RSEETKKLD 334
           KVK  D +E    + D+EECR+ T+ M    E   DL + +E ++LD
Sbjct: 293 KVKLNDEME--KRIDDIEECRYTTIDMVNGTEPNDDLGKIDEDEELD 337


>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical
           protein C44B9.4 protein.
          Length = 1150

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +2

Query: 242 DLEECRHPTVMMEMCAECGADLRSEETKKL 331
           D  E + PT+M E+CAEC  +L+ + T+ L
Sbjct: 207 DAMEDKRPTIMGEVCAEC--NLKDDWTRML 234


>Z73425-1|CAA97784.1|   97|Caenorhabditis elegans Hypothetical
           protein F12F6.2 protein.
          Length = 97

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 21/90 (23%), Positives = 37/90 (41%)
 Frame = +2

Query: 140 DGEELKKFKSSHAGTVSSIKVKEGDVVEPSSAVADLEECRHPTVMMEMCAECGADLRSEE 319
           D E LK+ K+         K +     +P++ V   E  RHPT+ +   +   A  R +E
Sbjct: 3   DAENLKQSKTRRMWVKRVAKKRGNQPSQPAADVMRGERVRHPTLSIPSVSCTAAIDRKKE 62

Query: 320 TKKLDVAIVPMVHSVPELKVSEELAQKLGK 409
               +  +V +      L+ S+ L   L +
Sbjct: 63  MMMKETMVVCVRSFSDALETSQRLRPFLSR 92


>U97007-1|AAB52291.1|  932|Caenorhabditis elegans Glutamate receptor
           family (ampa)protein 5 protein.
          Length = 932

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 194 IKVKEGDVVEPSSAVADLEECR 259
           IKV +GD ++ +  V +LEECR
Sbjct: 183 IKVHDGDYMKAARQVKELEECR 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,776,985
Number of Sequences: 27780
Number of extensions: 334845
Number of successful extensions: 1015
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)