Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0763
(520 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456961-1|CAG33242.1| 286|Homo sapiens SSR1 protein. 85 1e-16
BT007387-1|AAP36051.1| 286|Homo sapiens signal sequence recepto... 85 1e-16
BC007710-1|AAH07710.1| 286|Homo sapiens signal sequence recepto... 85 1e-16
AK222809-1|BAD96529.1| 286|Homo sapiens signal sequence recepto... 85 1e-16
AK222762-1|BAD96482.1| 286|Homo sapiens signal sequence recepto... 85 1e-16
AF156965-1|AAD48778.1| 286|Homo sapiens translocon-associated p... 85 1e-16
AK075562-1|BAC11701.1| 259|Homo sapiens protein ( Homo sapiens ... 85 2e-16
AL139095-1|CAI16444.1| 286|Homo sapiens signal sequence recepto... 84 2e-16
Z12830-1|CAA78290.1| 286|Homo sapiens SSR alpha subunit protein. 83 6e-16
BC044581-1|AAH44581.1| 523|Homo sapiens PKD2L2 protein protein. 30 5.6
AF182034-1|AAF65622.1| 624|Homo sapiens polycystic kidney disea... 30 5.6
AF118125-1|AAD46478.1| 609|Homo sapiens polycystin-2-like prote... 30 5.6
>CR456961-1|CAG33242.1| 286|Homo sapiens SSR1 protein.
Length = 286
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/93 (48%), Positives = 59/93 (63%)
Frame = +3
Query: 240 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 419
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 420 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQ 518
ES++ASFRYP DY +YIQNFTALP N V P++
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQR 150
>BT007387-1|AAP36051.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/93 (48%), Positives = 59/93 (63%)
Frame = +3
Query: 240 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 419
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 420 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQ 518
ES++ASFRYP DY +YIQNFTALP N V P++
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQR 150
>BC007710-1|AAH07710.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/93 (48%), Positives = 59/93 (63%)
Frame = +3
Query: 240 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 419
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 420 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQ 518
ES++ASFRYP DY +YIQNFTALP N V P++
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQR 150
>AK222809-1|BAD96529.1| 286|Homo sapiens signal sequence receptor,
alpha variant protein.
Length = 286
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/93 (48%), Positives = 59/93 (63%)
Frame = +3
Query: 240 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 419
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 420 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQ 518
ES++ASFRYP DY +YIQNFTALP N V P++
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQR 150
>AK222762-1|BAD96482.1| 286|Homo sapiens signal sequence receptor,
alpha variant protein.
Length = 286
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/93 (48%), Positives = 59/93 (63%)
Frame = +3
Query: 240 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 419
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 420 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQ 518
ES++ASFRYP DY +YIQNFTALP N V P++
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQR 150
>AF156965-1|AAD48778.1| 286|Homo sapiens translocon-associated
protein alpha subunit protein.
Length = 286
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/93 (48%), Positives = 59/93 (63%)
Frame = +3
Query: 240 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 419
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 420 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQ 518
ES++ASFRYP DY +YIQNFTALP N V P++
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQR 150
>AK075562-1|BAC11701.1| 259|Homo sapiens protein ( Homo sapiens
cDNA PSEC0262 fis, clone NT2RP3004505, highly similar to
TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT PRECURSOR.
).
Length = 259
Score = 84.6 bits (200), Expect = 2e-16
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 LVDDDESVVKSS-QDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVES 425
L +D+E+V S +D D + P+ DL D A V+F VGF NKG+ D++VES
Sbjct: 35 LTEDEETVEDSIIEDEDDEAEVEEDEPT--DLVEDFPANNIVKFLVGFTNKGTEDFIVES 92
Query: 426 MEASFRYPMDYTYYIQNFTALPYNREVKPKQ 518
++ASFRYP DY +YIQNFTALP N V P++
Sbjct: 93 LDASFRYPQDYQFYIQNFTALPLNTVVPPQR 123
>AL139095-1|CAI16444.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 84.2 bits (199), Expect = 2e-16
Identities = 44/88 (50%), Positives = 57/88 (64%)
Frame = +3
Query: 255 DDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVESMEA 434
+D ++S DTTILF K G+ D A V+F VGF NKG+ D++VES++A
Sbjct: 71 EDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVESLDA 122
Query: 435 SFRYPMDYTYYIQNFTALPYNREVKPKQ 518
SFRYP DY +YIQNFTALP N V P++
Sbjct: 123 SFRYPQDYQFYIQNFTALPLNTVVPPQR 150
>Z12830-1|CAA78290.1| 286|Homo sapiens SSR alpha subunit protein.
Length = 286
Score = 83.0 bits (196), Expect = 6e-16
Identities = 44/93 (47%), Positives = 59/93 (63%)
Frame = +3
Query: 240 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 419
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 420 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQ 518
ES++ASFRYP D+ +YIQNFTALP N V P++
Sbjct: 118 ESLDASFRYPQDHQFYIQNFTALPLNTVVPPQR 150
>BC044581-1|AAH44581.1| 523|Homo sapiens PKD2L2 protein protein.
Length = 523
Score = 29.9 bits (64), Expect = 5.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 20 MSNQLVRGSRMIFNNYTLFRRQVLL*NEINIFYVLDCTGGFIMPWK 157
+++ + RG+R+IF +++L+ V L I + TGG + W+
Sbjct: 220 LNSWITRGTRVIFIDFSLYNANVNLFCIIRLVAEFPATGGILTSWQ 265
>AF182034-1|AAF65622.1| 624|Homo sapiens polycystic kidney
disease-like 2 protein protein.
Length = 624
Score = 29.9 bits (64), Expect = 5.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 20 MSNQLVRGSRMIFNNYTLFRRQVLL*NEINIFYVLDCTGGFIMPWK 157
+++ + RG+R+IF +++L+ V L I + TGG + W+
Sbjct: 220 LNSWITRGTRVIFIDFSLYNANVNLFCIIRLVAEFPATGGILTSWQ 265
>AF118125-1|AAD46478.1| 609|Homo sapiens polycystin-2-like protein
protein.
Length = 609
Score = 29.9 bits (64), Expect = 5.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 20 MSNQLVRGSRMIFNNYTLFRRQVLL*NEINIFYVLDCTGGFIMPWK 157
+++ + RG+R+IF +++L+ V L I + TGG + W+
Sbjct: 220 LNSWITRGTRVIFIDFSLYNANVNLFCIIRLVAEFPATGGILTSWQ 265
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,232,717
Number of Sequences: 237096
Number of extensions: 1223239
Number of successful extensions: 1844
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1837
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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