Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0762
         (620 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    43   0.007
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    42   0.009
UniRef50_Q029U3 Cluster: Cna B domain protein precursor; n=1; So...    33   4.2  
UniRef50_Q2S6E8 Cluster: Putative Transaldolase Phosphoglucose i...    33   7.3  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 42.7 bits (96), Expect = 0.007
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +2

Query: 248 KWTDELTAHLVLSGYWSP 301
           +W DELTAHLVLSGYWSP
Sbjct: 158 RWVDELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 42.3 bits (95), Expect = 0.009
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +2

Query: 422 QAGWWYLPARTHKRSYHQ 475
           +A WWYLPARTHKRSYH+
Sbjct: 568 RAEWWYLPARTHKRSYHR 585


>UniRef50_Q029U3 Cluster: Cna B domain protein precursor; n=1;
           Solibacter usitatus Ellin6076|Rep: Cna B domain protein
           precursor - Solibacter usitatus (strain Ellin6076)
          Length = 1077

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 19/62 (30%), Positives = 27/62 (43%)
 Frame = +1

Query: 286 WLLEPIDIYNVNAPPTLRYKF*GLKYSYNGCPTLQTETHYCFTAETGGVVVPTRADSQEV 465
           W     D + V    TL Y   GL++ YNG      +  Y F   TG +VVP +   ++ 
Sbjct: 597 WSFYAQDDFKVTQRLTLMY---GLRWEYNGPAYALNDNQYSFDLATGKIVVPNQNSIKQF 653

Query: 466 LP 471
            P
Sbjct: 654 SP 655


>UniRef50_Q2S6E8 Cluster: Putative Transaldolase Phosphoglucose
           isomerase; n=1; Salinibacter ruber DSM 13855|Rep:
           Putative Transaldolase Phosphoglucose isomerase -
           Salinibacter ruber (strain DSM 13855)
          Length = 920

 Score = 32.7 bits (71), Expect = 7.3
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = +1

Query: 178 LFVVIS*MPTTTITLGFFNFFTD*VDGRAHSP 273
           LFVV S   TTT TL FF +F D V G   +P
Sbjct: 508 LFVVASKSGTTTETLSFFRYFWDRVSGLTDTP 539


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,463,370
Number of Sequences: 1657284
Number of extensions: 10289052
Number of successful extensions: 23328
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23322
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)