Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0762
         (620 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0182 + 20719782-20720033,20720502-20720605,20720693-207210...    29   3.9  
01_06_1749 - 39636951-39638102                                         29   3.9  
04_03_0988 - 21469811-21469831,21470823-21471047,21471327-214716...    28   6.9  
08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-26...    27   9.1  
03_06_0753 + 36015026-36015256,36015780-36015885,36016132-360161...    27   9.1  

>02_04_0182 +
           20719782-20720033,20720502-20720605,20720693-20721066,
           20721302-20721609,20721853-20722092
          Length = 425

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 20/51 (39%), Positives = 24/51 (47%)
 Frame = +1

Query: 274 PGVKWLLEPIDIYNVNAPPTLRYKF*GLKYSYNGCPTLQTETHYCFTAETG 426
           P +  L  PI +  VNA    +YK  G KY  +G PTL    H   T  TG
Sbjct: 90  PVLAGLSTPIVVAKVNAD---KYKKLGSKYGVDGFPTLMLFDHGTPTEYTG 137


>01_06_1749 - 39636951-39638102
          Length = 383

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 356 SSIVTTAAPPFKPKRITA 409
           SS+ + AAPPF P RIT+
Sbjct: 164 SSVASAAAPPFDPSRITS 181


>04_03_0988 -
           21469811-21469831,21470823-21471047,21471327-21471634,
           21471864-21472234,21472327-21472430,21473086-21473325
          Length = 422

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +1

Query: 274 PGVKWLLEPIDIYNVNAPPTLRYKF*GLKYSYNGCPTLQTETH 402
           P +  L EPI +  VNA    +Y+  G KY  +G PTL    H
Sbjct: 86  PVLAGLSEPIIVAKVNAD---KYRKLGSKYGVDGFPTLMLFIH 125


>08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-269805,
            269895-270098,271532-271664,271810-271881,273106-273168,
            273252-275034,275169-275217
          Length = 1229

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 389  KPKRITASQQKQAGWWYLPARTHKRSYHQ**YNKGIMCEGTGVVYLEY 532
            K  ++   QQK+ G WY P+   +  +     ++ +MC+G    Y  Y
Sbjct: 1121 KTSQLAIEQQKKLGCWYCPSCLCRGCFQDKDDDQIVMCDGCDEGYHIY 1168


>03_06_0753 +
           36015026-36015256,36015780-36015885,36016132-36016192,
           36016278-36016573,36016654-36016793,36016880-36016954,
           36017044-36017134,36017677-36017880,36018409-36018453,
           36018745-36018830
          Length = 444

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 371 TAAPPFKPKRITASQQKQAGWWYLPARTHKRSYH 472
           TAA P +PK++  S Q Q      P + H+RS+H
Sbjct: 46  TAAAPDQPKQVRPSNQNQ------PKKGHQRSHH 73


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,953,232
Number of Sequences: 37544
Number of extensions: 282205
Number of successful extensions: 595
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)