Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0762
         (620 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nea...    27   7.6  
At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nea...    27   7.6  
At2g14720.2 68415.m01657 vacuolar sorting receptor, putative ide...    27   7.6  
At2g14720.1 68415.m01656 vacuolar sorting receptor, putative ide...    27   7.6  

>At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nearly
           identical to vacuolar sorting receptor homolog
           [Arabidopsis thaliana] GI:1737220; contains a
           calcium-binding EGF-like domain signature
          Length = 628

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 51  YCSHSFRLSTPVKTYIVNVNNTIVPVHEIDF 143
           YC H+F LS   K+  +N      P  E DF
Sbjct: 240 YCPHAFTLSRQCKSQCINKGRYCAPDPEQDF 270


>At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nearly
           identical to vacuolar sorting receptor homolog
           [Arabidopsis thaliana] GI:1737220; contains a
           calcium-binding EGF-like domain signature
          Length = 628

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 51  YCSHSFRLSTPVKTYIVNVNNTIVPVHEIDF 143
           YC H+F LS   K+  +N      P  E DF
Sbjct: 240 YCPHAFTLSRQCKSQCINKGRYCAPDPEQDF 270


>At2g14720.2 68415.m01657 vacuolar sorting receptor, putative
           identical to GB:U79960 GI:1737220; contains a
           calcium-binding EGF-like domain signature
          Length = 628

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 51  YCSHSFRLSTPVKTYIVNVNNTIVPVHEIDF 143
           YC H+F LS   K+  +N      P  E DF
Sbjct: 240 YCPHAFTLSRQCKSQCINKGRYCAPDPEQDF 270


>At2g14720.1 68415.m01656 vacuolar sorting receptor, putative
           identical to GB:U79960 GI:1737220; contains a
           calcium-binding EGF-like domain signature
          Length = 628

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 51  YCSHSFRLSTPVKTYIVNVNNTIVPVHEIDF 143
           YC H+F LS   K+  +N      P  E DF
Sbjct: 240 YCPHAFTLSRQCKSQCINKGRYCAPDPEQDF 270


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,020,039
Number of Sequences: 28952
Number of extensions: 226134
Number of successful extensions: 433
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1255974912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)