Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0761
         (542 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.32 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    24   0.75 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.2  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.2  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 25.4 bits (53), Expect = 0.32
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 264 TLKINSVLSNSVDYYLCTGVKSIYVFGLSVFLKCIV 371
           TL IN++   +  YYLC  V  I   GLS  ++  V
Sbjct: 759 TLTINNIQKTNEGYYLCEAVNGI-GSGLSAVIQISV 793


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 24.2 bits (50), Expect = 0.75
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 232 ICLCVFGLRNHD 197
           +CLC+FG + HD
Sbjct: 332 VCLCLFGAKVHD 343


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = -2

Query: 277 FIFNVIIDLNFKI*FICLCVFGLRNHDIASIFYFHCYFLV 158
           F +  II     +  +C+  F +    +  I+YF+C F++
Sbjct: 116 FYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFII 155


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 91  NKYI*NKKYRTDLK 132
           N+Y  N++YRTD K
Sbjct: 286 NQYQMNQEYRTDRK 299


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = +2

Query: 215 KYTQTNELNFKIQINYNIKNKLCTKQLSGLLSLHRRQKHIC 337
           K++ +N+L   + I+ N K   C K        H    H C
Sbjct: 227 KFSDSNQLKAHVLIHTNEKPFECDKCRGRFRRRHHLVHHKC 267


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 91  NKYI*NKKYRTDLK 132
           N+Y  N++YRTD K
Sbjct: 234 NQYQMNQEYRTDRK 247


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 91  NKYI*NKKYRTDLK 132
           N+Y  N++YRTD K
Sbjct: 417 NQYQMNQEYRTDRK 430


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,998
Number of Sequences: 336
Number of extensions: 2135
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)