Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0761
(542 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF116529-1|AAD05570.1| 961|Caenorhabditis elegans synthetic mul... 28 3.8
AF000195-1|AAC24266.2| 961|Caenorhabditis elegans Abnormal cell... 28 3.8
Z93374-6|CAB07559.1| 108|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z48638-4|CAD57721.1| 312|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z48638-3|CAD57720.1| 221|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z48638-2|CAC42392.1| 285|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z48638-1|CAA88570.2| 297|Caenorhabditis elegans Hypothetical pr... 27 6.6
AB038504-1|BAB11969.1| 297|Caenorhabditis elegans galectin LEC-... 27 6.6
Z93374-7|CAB07560.1| 106|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81475-4|CAB03911.1| 323|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z71258-3|CAA95778.1| 187|Caenorhabditis elegans Hypothetical pr... 27 8.7
>AF116529-1|AAD05570.1| 961|Caenorhabditis elegans synthetic
multivulva protein LIN-35 Rb protein.
Length = 961
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 101 IYLLLMLKINVCHLKKKKKNSRLVLSLPRAEFL 3
++L+ M KI V LKKK + L+ + R EFL
Sbjct: 579 VFLIFMEKIIVAELKKKVREEDLLNVIRREEFL 611
>AF000195-1|AAC24266.2| 961|Caenorhabditis elegans Abnormal cell
lineage protein 35 protein.
Length = 961
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 101 IYLLLMLKINVCHLKKKKKNSRLVLSLPRAEFL 3
++L+ M KI V LKKK + L+ + R EFL
Sbjct: 579 VFLIFMEKIIVAELKKKVREEDLLNVIRREEFL 611
>Z93374-6|CAB07559.1| 108|Caenorhabditis elegans Hypothetical
protein C06C6.8 protein.
Length = 108
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = -1
Query: 137 TDFKSVLYFLFHIYLLLMLKINVCHLKKKKKNSRLVLSLPR 15
T FKS+ + F +LLL++ I C KKK K+ V +PR
Sbjct: 6 TIFKSITLY-FGPFLLLIVSIVNCQSKKKFKDDGRVDLVPR 45
>Z48638-4|CAD57721.1| 312|Caenorhabditis elegans Hypothetical
protein ZK892.1d protein.
Length = 312
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 73 FILSINNKYI*NKKYRTDLKSVRHLNI 153
F +SIN+K + N ++R L SV HL+I
Sbjct: 108 FQVSINHKEVKNFEHRIPLNSVSHLSI 134
>Z48638-3|CAD57720.1| 221|Caenorhabditis elegans Hypothetical
protein ZK892.1c protein.
Length = 221
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 73 FILSINNKYI*NKKYRTDLKSVRHLNI 153
F +SIN+K + N ++R L SV HL+I
Sbjct: 108 FQVSINHKEVKNFEHRIPLNSVSHLSI 134
>Z48638-2|CAC42392.1| 285|Caenorhabditis elegans Hypothetical
protein ZK892.1b protein.
Length = 285
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 73 FILSINNKYI*NKKYRTDLKSVRHLNI 153
F +SIN+K + N ++R L SV HL+I
Sbjct: 104 FQVSINHKEVKNFEHRIPLNSVSHLSI 130
>Z48638-1|CAA88570.2| 297|Caenorhabditis elegans Hypothetical
protein ZK892.1a protein.
Length = 297
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 73 FILSINNKYI*NKKYRTDLKSVRHLNI 153
F +SIN+K + N ++R L SV HL+I
Sbjct: 104 FQVSINHKEVKNFEHRIPLNSVSHLSI 130
>AB038504-1|BAB11969.1| 297|Caenorhabditis elegans galectin LEC-3
protein.
Length = 297
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 73 FILSINNKYI*NKKYRTDLKSVRHLNI 153
F +SIN+K + N ++R L SV HL+I
Sbjct: 104 FQVSINHKEVKNFEHRIPLNSVSHLSI 130
>Z93374-7|CAB07560.1| 106|Caenorhabditis elegans Hypothetical
protein C06C6.9 protein.
Length = 106
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 137 TDFKSVLYFLFHIYLLLMLKINVCHLKKKKKNSRLVLSLPR 15
T FKS+ + F +LLL++ I C KKK K+ +PR
Sbjct: 6 TIFKSITLY-FGPFLLLVVSIVNCQSKKKFKDDERANLVPR 45
>Z81475-4|CAB03911.1| 323|Caenorhabditis elegans Hypothetical
protein C24H11.4 protein.
Length = 323
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 254 INYNIKNK-LCTKQLSGLLSLHRRQKHIC 337
I YN N LCT LS LLS++ R IC
Sbjct: 92 IGYNFYNLFLCTTNLSILLSMYYRYSLIC 120
>Z71258-3|CAA95778.1| 187|Caenorhabditis elegans Hypothetical
protein C01H6.3 protein.
Length = 187
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 248 IQINYNIKNKLCTKQLSGLLSLHRRQKHICVRFECILKMY 367
+Q ++N + C + + +SL Q H CVRFE ++ Y
Sbjct: 148 VQSSHNCQIVRC-RFCNARISLQHAQSHQCVRFEPTIEFY 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,294,754
Number of Sequences: 27780
Number of extensions: 187225
Number of successful extensions: 373
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 373
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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