Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0761
         (542 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g15040.1 68417.m02310 subtilase family protein contains simil...    30   1.1  
At5g55360.1 68418.m06898 long-chain-alcohol O-fatty-acyltransfer...    29   1.5  
At1g34480.1 68414.m04285 DC1 domain-containing protein contains ...    27   6.1  

>At4g15040.1 68417.m02310 subtilase family protein contains
           similarity to prepro-cucumisin GI:807698 from [Cucumis
           melo]
          Length = 687

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 255 SIITLKINSVLSNSVDYYLCTGVKSI--YVFGLSVFLKCIVPIYC*SKI 395
           SI T   N V   SVDYY  TG      +V G++ ++K + P +  S I
Sbjct: 457 SIFTTGSNRVPGQSVDYYFMTGTSMACPHVAGVAAYVKTLRPDWSASAI 505


>At5g55360.1 68418.m06898 long-chain-alcohol O-fatty-acyltransferase
           family protein / wax synthase family protein contains
           similarity to wax synthase similarity to wax synthase
           wax synthase - Simmondsia chinensis, PID:g5020219
           similar to wax synthase [gi:5020219] from Simmondsia
           chinensis
          Length = 342

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 246 KFKSIITLKINSVLSNSVDYYLCTGVKSIYVFGLSVFLKC 365
           + K+ I L I++++S S  YYL TG+K+     LSV   C
Sbjct: 4   ELKNFIKLWISAIISISYCYYLSTGIKAGVFRLLSVLPVC 43


>At1g34480.1 68414.m04285 DC1 domain-containing protein contains
           Pfam protein PF03107 DC1 domain
          Length = 602

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +2

Query: 275 KLCTKQLSGLLSLHRRQKHICVRFECILKMYSTYL 379
           K C K+    +      + IC   EC+ +M+S+Y+
Sbjct: 560 KKCNKRCQNGIVYKNSDETICCSMECLYQMFSSYI 594


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,244,705
Number of Sequences: 28952
Number of extensions: 153783
Number of successful extensions: 277
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1013649368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)