Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0759
(659 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0835 + 8147177-8147359,8147871-8147968,8148045-8148102,814... 144 7e-35
04_04_1075 + 30634141-30634320,30634917-30635014,30635113-306351... 143 1e-34
08_02_1442 + 27120604-27120890,27121029-27121166,27121280-271213... 93 2e-19
10_06_0101 + 10736987-10737100,10737263-10737301,10737397-107374... 30 1.9
01_07_0288 + 42534552-42534558,42535302-42537280,42537367-425375... 28 5.7
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 28 5.7
04_04_1096 + 30855192-30855225,30856135-30856208,30856293-308564... 28 7.6
01_06_0457 - 29524544-29525962,29526518-29526606,29526841-295268... 28 7.6
>08_01_0835 +
8147177-8147359,8147871-8147968,8148045-8148102,
8148192-8148271,8148770-8148872,8148966-8149181
Length = 245
Score = 144 bits (348), Expect = 7e-35
Identities = 64/94 (68%), Positives = 81/94 (86%)
Frame = +3
Query: 375 EAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYP 554
EAKL FV+RIRGIN + PK RK+LQL RLRQI NGVF+++NKAT+NMLR EPY+A+GYP
Sbjct: 83 EAKLLFVVRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYP 142
Query: 555 NLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRL 656
NLKSVREL+YKRG+ KL+ QRIP+ +N ++E+ L
Sbjct: 143 NLKSVRELIYKRGYGKLNKQRIPLQNNKVIEEGL 176
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +2
Query: 146 KLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEI 325
K VPESVLK + L + A++ ++ IF RA+QY +EY +E++ +
Sbjct: 7 KAAVVPESVLKKRKREEQWAADRKEKALAEKKKAVESRKLIFARAKQYAQEYDAQEKELV 66
Query: 326 RLARQARNRGNYYV 367
+L R+AR +G +YV
Sbjct: 67 QLKREARMKGGFYV 80
>04_04_1075 +
30634141-30634320,30634917-30635014,30635113-30635170,
30635259-30635338,30635686-30635788,30635847-30636080
Length = 250
Score = 143 bits (347), Expect = 1e-34
Identities = 63/92 (68%), Positives = 80/92 (86%)
Frame = +3
Query: 375 EAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYP 554
E KL FV+RIRGIN + PK RK+LQL RLRQI NGVF+++NKAT+NMLR EPY+A+GYP
Sbjct: 82 EEKLLFVVRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYP 141
Query: 555 NLKSVRELVYKRGFAKLSGQRIPITSNSIVEK 650
NLKSVREL+YKRG+ KL+ QRIP+T+N ++E+
Sbjct: 142 NLKSVRELIYKRGYGKLNKQRIPLTNNKVIEE 173
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/70 (32%), Positives = 41/70 (58%)
Frame = +2
Query: 158 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLAR 337
VPESVL+ + + + +I+ ++ IF RA+QY +EY +E++ ++L R
Sbjct: 10 VPESVLRKRKREEVWAAASKEKAVAEKKKSIESRKLIFSRAKQYAEEYEAQEKELVQLKR 69
Query: 338 QARNRGNYYV 367
+AR +G +YV
Sbjct: 70 EARMKGGFYV 79
>08_02_1442 +
27120604-27120890,27121029-27121166,27121280-27121382,
27121877-27122036,27122927-27123114,27123203-27124770,
27124882-27125869,27126595-27127098,27127347-27127433,
27127753-27127821,27128012-27128041
Length = 1373
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/93 (43%), Positives = 63/93 (67%)
Frame = +3
Query: 378 AKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPN 557
+KL F IRI G + P +R++L+ RL Q+ GVF++ AT+ L + EP+I +G+PN
Sbjct: 86 SKLVFAIRIPGTMDLHPHMRRILRKLRLTQVLTGVFLKATDATMKRLLVVEPFITYGFPN 145
Query: 558 LKSVRELVYKRGFAKLSGQRIPITSNSIVEKRL 656
LK+V++L+YK+G L + P+TSN ++EK L
Sbjct: 146 LKNVKDLIYKKGRGFLDKEPFPLTSNDLIEKAL 178
>10_06_0101 +
10736987-10737100,10737263-10737301,10737397-10737474,
10737539-10737685,10737781-10737888,10738115-10738449,
10738572-10739544,10739702-10739980
Length = 690
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 224 TLKRRSSAIKKKREIF--KRAEQYVKE-YRIKERDEIRLARQARNRGNYY 364
TL+ R+ IK KRE+F KR E ++E ++ + E+ + A NR +
Sbjct: 149 TLETRTDPIKLKREVFRRKRKEHRIQELLQVDKEAELHMRNVATNRSRNF 198
>01_07_0288 +
42534552-42534558,42535302-42537280,42537367-42537513,
42537982-42538526,42538906-42538981,42539357-42539437
Length = 944
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 383 FGFPRERSSCHDCVLV 336
FGF R+R +CH+C LV
Sbjct: 463 FGFTRKRHNCHNCGLV 478
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 352 WQLLRSRGKPNWHLSSESVVSTKFHRRSVKFCNCLD 459
WQ + K N ESV F R +KFC+C D
Sbjct: 224 WQSNMNNVKVNKTAHRESVRDLSFCRTDLKFCSCSD 259
>04_04_1096 +
30855192-30855225,30856135-30856208,30856293-30856467,
30856842-30856918,30857042-30857279,30857414-30857478,
30857628-30858086,30858253-30858465,30858613-30859002
Length = 574
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/61 (21%), Positives = 28/61 (45%)
Frame = +2
Query: 221 VTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGGSQIGICHP 400
V K S+++ K++I + + + ++ + A+ +G++ GG Q I P
Sbjct: 22 VVEKSPSTSVSVKKQILSSEDHNLSSTALHGASSLKSTKSAQEKGSFLGKGGEQHFIYQP 81
Query: 401 N 403
N
Sbjct: 82 N 82
>01_06_0457 -
29524544-29525962,29526518-29526606,29526841-29526892,
29527573-29527677,29528181-29528208,29528279-29528343,
29528808-29528880,29528932-29529113
Length = 670
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 533 LHCLGIPQLKECP*VSIQTWIRQAEW 610
LHC G+PQ+K +W+R +E+
Sbjct: 109 LHCSGLPQIKLLSRFRRSSWVRTSEY 134
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,686,332
Number of Sequences: 37544
Number of extensions: 322276
Number of successful extensions: 744
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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