Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0759
         (659 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal  pro...   170   1e-42
AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p pro...   170   1e-42
AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA...   170   1e-42
BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p pro...    82   8e-16
AY071314-1|AAL48936.1|  257|Drosophila melanogaster RE33833p pro...    77   3e-14
BT029578-1|ABL75637.1|  257|Drosophila melanogaster IP16905p pro...    75   1e-13
BT029555-1|ABL75615.1|  257|Drosophila melanogaster IP16805p pro...    75   1e-13
BT021218-1|AAX33366.1|  257|Drosophila melanogaster RH63749p pro...    75   1e-13
AE014134-2146|AAF53155.2|  257|Drosophila melanogaster CG5317-PA...    75   1e-13
AE014297-4130|AAF56715.1|  448|Drosophila melanogaster CG13972-P...    29   4.2  

>X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal
           protein protein.
          Length = 239

 Score =  170 bits (414), Expect = 1e-42
 Identities = 76/96 (79%), Positives = 89/96 (92%)
 Frame = +3

Query: 369 PGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWG 548
           P EAKLAFV+RIRGIN+V+PKVRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI WG
Sbjct: 74  PAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWG 133

Query: 549 YPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRL 656
           YPNLKSVREL+YKRGF K + QR+PIT N ++E++L
Sbjct: 134 YPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKL 169



 Score = 52.0 bits (119), Expect = 7e-07
 Identities = 29/79 (36%), Positives = 42/79 (53%)
 Frame = +2

Query: 149 LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIR 328
           LPAVPES LK             +  LK+ +    +K+E   RAE+Y  EY   E+ EI+
Sbjct: 1   LPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEYIKAEQREIK 60

Query: 329 LARQARNRGNYYVPGGSQI 385
           L R A+ R  +YVP  +++
Sbjct: 61  LRRLAKKRNQFYVPAEAKL 79


>AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p
           protein.
          Length = 252

 Score =  170 bits (414), Expect = 1e-42
 Identities = 76/96 (79%), Positives = 89/96 (92%)
 Frame = +3

Query: 369 PGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWG 548
           P EAKLAFV+RIRGIN+V+PKVRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI WG
Sbjct: 87  PAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWG 146

Query: 549 YPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRL 656
           YPNLKSVREL+YKRGF K + QR+PIT N ++E++L
Sbjct: 147 YPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKL 182



 Score = 60.1 bits (139), Expect = 3e-09
 Identities = 34/89 (38%), Positives = 48/89 (53%)
 Frame = +2

Query: 119 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKE 298
           PV  K  +KKLPAVPES LK             +  LK+ +    +K+E   RAE+Y  E
Sbjct: 4   PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63

Query: 299 YRIKERDEIRLARQARNRGNYYVPGGSQI 385
           Y   E+ EI+L R A+ R  +YVP  +++
Sbjct: 64  YIKAEQREIKLRRLAKKRNQFYVPAEAKL 92


>AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA
           protein.
          Length = 252

 Score =  170 bits (414), Expect = 1e-42
 Identities = 76/96 (79%), Positives = 89/96 (92%)
 Frame = +3

Query: 369 PGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWG 548
           P EAKLAFV+RIRGIN+V+PKVRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI WG
Sbjct: 87  PAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWG 146

Query: 549 YPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRL 656
           YPNLKSVREL+YKRGF K + QR+PIT N ++E++L
Sbjct: 147 YPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKL 182



 Score = 60.1 bits (139), Expect = 3e-09
 Identities = 34/89 (38%), Positives = 48/89 (53%)
 Frame = +2

Query: 119 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKE 298
           PV  K  +KKLPAVPES LK             +  LK+ +    +K+E   RAE+Y  E
Sbjct: 4   PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63

Query: 299 YRIKERDEIRLARQARNRGNYYVPGGSQI 385
           Y   E+ EI+L R A+ R  +YVP  +++
Sbjct: 64  YIKAEQREIKLRRLAKKRNQFYVPAEAKL 92


>BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p
           protein.
          Length = 227

 Score = 81.8 bits (193), Expect = 8e-16
 Identities = 43/92 (46%), Positives = 59/92 (64%)
 Frame = -1

Query: 653 PLLNNAVGSDWYTLSTQLGESTFVY*LTDTL*VGVSPSNVRLGDT*HIHSSLIQTYKHTI 474
           PL +  +G D + L+  L EST V  L   L +G++P +V LGD  H+   L+Q  +HT+
Sbjct: 17  PLDHEVIG-DGHALAVMLHESTLVDQLPHGLQIGIAPGDVGLGDAQHVDGGLVQLDEHTV 75

Query: 473 VYLAQSKQLQNFTDLR*NLVDTTDSDDKCQFG 378
           V L Q++QLQN  DL  +LVDT D+DDK QFG
Sbjct: 76  VDLPQTEQLQNLADLGSHLVDTADTDDKGQFG 107


>AY071314-1|AAL48936.1|  257|Drosophila melanogaster RE33833p
           protein.
          Length = 257

 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 34/92 (36%), Positives = 58/92 (63%)
 Frame = +3

Query: 381 KLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNL 560
           KL FV+R+ G          + +  R+   +N VF+   K    +LR+ EP++ +G P+L
Sbjct: 96  KLLFVMRLAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSL 155

Query: 561 KSVRELVYKRGFAKLSGQRIPITSNSIVEKRL 656
            S+RELV+K+GFA++ G++  I SN++VE++L
Sbjct: 156 SSIRELVFKKGFARIDGKKTAIQSNTMVEQQL 187


>BT029578-1|ABL75637.1|  257|Drosophila melanogaster IP16905p
           protein.
          Length = 257

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 34/92 (36%), Positives = 57/92 (61%)
 Frame = +3

Query: 381 KLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNL 560
           KL FV+R  G          + +  R+   +N VF+   K    +LR+ EP++ +G P+L
Sbjct: 96  KLLFVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSL 155

Query: 561 KSVRELVYKRGFAKLSGQRIPITSNSIVEKRL 656
            S+RELV+K+GFA++ G++  I SN++VE++L
Sbjct: 156 SSIRELVFKKGFARIDGKKTAIQSNTMVEQQL 187


>BT029555-1|ABL75615.1|  257|Drosophila melanogaster IP16805p
           protein.
          Length = 257

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 34/92 (36%), Positives = 57/92 (61%)
 Frame = +3

Query: 381 KLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNL 560
           KL FV+R  G          + +  R+   +N VF+   K    +LR+ EP++ +G P+L
Sbjct: 96  KLLFVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSL 155

Query: 561 KSVRELVYKRGFAKLSGQRIPITSNSIVEKRL 656
            S+RELV+K+GFA++ G++  I SN++VE++L
Sbjct: 156 SSIRELVFKKGFARIDGKKTAIQSNTMVEQQL 187


>BT021218-1|AAX33366.1|  257|Drosophila melanogaster RH63749p
           protein.
          Length = 257

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 34/92 (36%), Positives = 57/92 (61%)
 Frame = +3

Query: 381 KLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNL 560
           KL FV+R  G          + +  R+   +N VF+   K    +LR+ EP++ +G P+L
Sbjct: 96  KLLFVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSL 155

Query: 561 KSVRELVYKRGFAKLSGQRIPITSNSIVEKRL 656
            S+RELV+K+GFA++ G++  I SN++VE++L
Sbjct: 156 SSIRELVFKKGFARIDGKKTAIQSNTMVEQQL 187


>AE014134-2146|AAF53155.2|  257|Drosophila melanogaster CG5317-PA
           protein.
          Length = 257

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 34/92 (36%), Positives = 57/92 (61%)
 Frame = +3

Query: 381 KLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNL 560
           KL FV+R  G          + +  R+   +N VF+   K    +LR+ EP++ +G P+L
Sbjct: 96  KLLFVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSL 155

Query: 561 KSVRELVYKRGFAKLSGQRIPITSNSIVEKRL 656
            S+RELV+K+GFA++ G++  I SN++VE++L
Sbjct: 156 SSIRELVFKKGFARIDGKKTAIQSNTMVEQQL 187


>AE014297-4130|AAF56715.1|  448|Drosophila melanogaster CG13972-PA
           protein.
          Length = 448

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 11/38 (28%), Positives = 24/38 (63%)
 Frame = +2

Query: 218 QVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRL 331
           ++ +  +   ++K +EI++    YV+EYR ++ +E RL
Sbjct: 367 ELRILEQKKLLQKHKEIYEERMTYVQEYRAQKEEEQRL 404


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,592,754
Number of Sequences: 53049
Number of extensions: 543198
Number of successful extensions: 1384
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)