Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0758
         (591 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.        26   1.0  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    25   1.8  
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    24   4.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   7.4  

>DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.
          Length = 482

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -2

Query: 278 SVAIPNVDMKLGRRAS-GGALSVTALTRGTPSLS 180
           S  +  +D+++  R + GGA+++TA+ R  P ++
Sbjct: 420 SEMVHKIDLEINERGTEGGAVTITAMERSLPPVN 453


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 164 CRPFTFSSK*FKYFLRSSTIFFTVKNLFL 78
           C P  FS   FK  +R  T+F+TV NL +
Sbjct: 227 CCPEPFSDITFKLTMRRKTLFYTV-NLII 254


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = +1

Query: 268 MATDQASKLGLGRNKTIISMYSSYQVVQMSKLPLVITF 381
           +A  Q ++     +KT+ +++SSY V     +P+ ++F
Sbjct: 160 VAYPQRNRQWCDMSKTLAAIFSSYVVCPFLAVPIYLSF 197


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 317 LYQCILVIRWYK*ANY 364
           L +C LVIRW   ANY
Sbjct: 627 LPKCNLVIRWNSPANY 642


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,934
Number of Sequences: 2352
Number of extensions: 13040
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)