Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0758
         (591 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75526-6|CAD21698.1|  145|Caenorhabditis elegans Hypothetical pr...    41   8e-04
AC087081-12|AAK66039.2|  324|Caenorhabditis elegans Hypothetical...    33   0.20 
U28738-3|AAA68310.2|  468|Caenorhabditis elegans Hypothetical pr...    31   0.81 
Z99288-7|CAB63421.1|  362|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U23412-4|AAK21468.3|  697|Caenorhabditis elegans Ubiquitin-like ...    29   1.9  
AF016451-11|AAB65999.1|  327|Caenorhabditis elegans Hypothetical...    29   1.9  
AB095020-1|BAC22612.1|  697|Caenorhabditis elegans similar to SU...    29   1.9  
Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical pr...    27   7.5  
AF016657-7|AAB93660.1|  164|Caenorhabditis elegans Hypothetical ...    27   7.5  
U40799-2|AAA81480.1|  712|Caenorhabditis elegans Hypothetical pr...    27   10.0 
AF016657-1|AAB93653.1|  361|Caenorhabditis elegans Hypothetical ...    27   10.0 

>Z75526-6|CAD21698.1|  145|Caenorhabditis elegans Hypothetical
           protein C06H2.6 protein.
          Length = 145

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
 Frame = +1

Query: 115 DLRKYLNHLLEKVNGLHCILITDRDGVPLVR-AVTERAPPLALRPNFISTFGMATDQASK 291
           ++++ L  L+    G+  I ITD DG  ++   +         R   I +      Q  K
Sbjct: 2   NVQQELEELMLTYEGVCAIFITDHDGGLILNIGLPSTLDNSRFRQQLIVSHVTTIPQIHK 61

Query: 292 LGLGRNKTIISMYSSYQVVQMSKLPLVITFIGSDNCNTGHILSLESQIEP 441
           L +G ++T  ++Y S+Q+   S            N NTG +LSL  ++ P
Sbjct: 62  LDMGGHQTTFALYESHQIAVHSIDKYYFIVHAGTNTNTGAMLSLREKLFP 111


>AC087081-12|AAK66039.2|  324|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.17 protein.
          Length = 324

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = -2

Query: 101 FTVKNLFLLLEIWKASKY*IVKKIRF 24
           +T KNL LLL+ WKA K+  VKK+ F
Sbjct: 144 YTNKNLKLLLKTWKAKKWNHVKKLEF 169


>U28738-3|AAA68310.2|  468|Caenorhabditis elegans Hypothetical
           protein T28D9.4 protein.
          Length = 468

 Score = 30.7 bits (66), Expect = 0.81
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = -2

Query: 584 YKDEYRLNQIALIYFKNMFI*VIYEKYFGFACLIQGASATTTSK 453
           ++D YR   I + Y   + I VIY  +  F  L   ASA T SK
Sbjct: 45  HEDNYRNPMIRMAYIPIVIIAVIYSSFIFFFALFIEASAHTNSK 88


>Z99288-7|CAB63421.1|  362|Caenorhabditis elegans Hypothetical
           protein ZK262.8 protein.
          Length = 362

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +1

Query: 64  HISKSKKRFFTVKNMVDDLRKYLNHLLEKVNGLHCILITDRD 189
           H+ +S+         +D++R  ++ L EK+ G H  LI D D
Sbjct: 151 HLGESRDESAVTNAALDNIRGMVSRLEEKIAGSHATLIQDLD 192


>U23412-4|AAK21468.3|  697|Caenorhabditis elegans Ubiquitin-like
           protease protein 1 protein.
          Length = 697

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 16/71 (22%), Positives = 32/71 (45%)
 Frame = +1

Query: 103 NMVDDLRKYLNHLLEKVNGLHCILITDRDGVPLVRAVTERAPPLALRPNFISTFGMATDQ 282
           N + DL+K  NHL  +   L  ++ + +     +  + E+ P    R +       A ++
Sbjct: 281 NTIIDLKKIKNHLSSRDRLLQGVVASGQYEAKAISGIVEKKPKKMQRTSSTDILARAKNK 340

Query: 283 ASKLGLGRNKT 315
            ++LG  R+ T
Sbjct: 341 IAELGGSRSNT 351


>AF016451-11|AAB65999.1|  327|Caenorhabditis elegans Hypothetical
           protein C03A7.2 protein.
          Length = 327

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +1

Query: 64  HISKSKKRFFTVKNMVDDLRKYLNHLLEKVNGLHCILITDRD 189
           H+ +S+         +D++R  ++ L EK+ G H  LI D D
Sbjct: 110 HLGESRDETAVTNAALDNIRGMVSRLEEKIAGSHATLIQDLD 151


>AB095020-1|BAC22612.1|  697|Caenorhabditis elegans similar to
           SUMO-1-specific protease protein.
          Length = 697

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 16/71 (22%), Positives = 32/71 (45%)
 Frame = +1

Query: 103 NMVDDLRKYLNHLLEKVNGLHCILITDRDGVPLVRAVTERAPPLALRPNFISTFGMATDQ 282
           N + DL+K  NHL  +   L  ++ + +     +  + E+ P    R +       A ++
Sbjct: 281 NTIIDLKKIKNHLSSRDRLLQGVVASGQYEAKAISGIVEKKPKKMQRTSSTDILARAKNK 340

Query: 283 ASKLGLGRNKT 315
            ++LG  R+ T
Sbjct: 341 IAELGGSRSNT 351


>Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical
           protein F26D10.9a protein.
          Length = 613

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 367 LVITFIGSDNCNTGHILSLESQIEPFLKDLEV-VVADAP*IKQAKPKYFS 513
           L  TF  SDN   G    +  +I+ FL+ + V  V   P IK  K +YF+
Sbjct: 108 LTATFYDSDNDGVGDFAGISQKID-FLRKIGVTTVYPTPVIKIHKDEYFN 156


>AF016657-7|AAB93660.1|  164|Caenorhabditis elegans Hypothetical
           protein C16C4.16 protein.
          Length = 164

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 483 NQTSETKIFLINYSYKHVFKIYQG 554
           N+    KIFL+N++ KH+  I +G
Sbjct: 9   NRDENQKIFLLNHTVKHISSIKEG 32


>U40799-2|AAA81480.1|  712|Caenorhabditis elegans Hypothetical
           protein F42C5.4 protein.
          Length = 712

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = +1

Query: 52  LLAFHISKSKKRFFTVKNMVDDLRKYLNHLLEKVN 156
           L  + + KSK R+F + +M +++ + +N L  ++N
Sbjct: 660 LNTYGLLKSKCRYFFINSMKEEINEEMNRLSNEIN 694


>AF016657-1|AAB93653.1|  361|Caenorhabditis elegans Hypothetical
           protein C16C4.7 protein.
          Length = 361

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 23  QTLFFSQ--FSIC*LSIFLRARKDFSL*KIWLTI 118
           Q  FF +   SIC +S F R+R  FS  +IWL I
Sbjct: 158 QNKFFLRHLISICRISTFSRSRIRFSYSRIWLHI 191


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,010,932
Number of Sequences: 27780
Number of extensions: 297256
Number of successful extensions: 660
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)