Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0757
         (493 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68009-2|CAA92004.2|  891|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z81485-6|CAB03979.1|  784|Caenorhabditis elegans Hypothetical pr...    27   5.6  

>Z68009-2|CAA92004.2|  891|Caenorhabditis elegans Hypothetical
           protein R09A8.2 protein.
          Length = 891

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 245 FWLLSRHGSHNPEANETAELQQLVDLKNNI 334
           FW   +H S   +ANE A     +D+++N+
Sbjct: 759 FWQKEKHESSRDDANENASFVHSLDVESNV 788


>Z81485-6|CAB03979.1|  784|Caenorhabditis elegans Hypothetical
           protein C49F5.6 protein.
          Length = 784

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 17/64 (26%), Positives = 29/64 (45%)
 Frame = +2

Query: 188 NRGIPNAKAHEVPGCQPVAFWLLSRHGSHNPEANETAELQQLVDLKNNIVTNYKNGNFRN 367
           ++ +PN  + E P    V    +  +G    +  + A  + LV  K+N   NY +   + 
Sbjct: 86  SKSVPNILSGEYPNSVCVVANSIDENGDAGVDVTDCASTKPLVLGKDNYQDNYWDS--QE 143

Query: 368 TNHR 379
           TNHR
Sbjct: 144 TNHR 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,926,096
Number of Sequences: 27780
Number of extensions: 208894
Number of successful extensions: 611
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)