Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0756
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical p...    27   7.7  
Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical p...    27   7.7  
Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical p...    27   7.7  

>U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical
           protein C25H3.8 protein.
          Length = 2148

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -1

Query: 508 NDPRQIFPVKLLHTSTGTHDY-LTAETGVIMILILTSFKHIVKKKRVCECP 359
           N P+  FPV L HT +G H    T  T  I   ++    HI+ KK   ECP
Sbjct: 382 NGPKNCFPVILQHTDSGKHSRPATPVTSSINSSLMLE-AHIMMKKD--ECP 429


>Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 316 YLSNNFCPRLRPRGIVFFLLPL*ADEHTAYLMLSGY 209
           YL+ NFC R++ RG++  L  L + +H   L +  Y
Sbjct: 448 YLNINFCRRVQKRGLLCLLSCLTSLDHLEVLGIRAY 483


>Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 316 YLSNNFCPRLRPRGIVFFLLPL*ADEHTAYLMLSGY 209
           YL+ NFC R++ RG++  L  L + +H   L +  Y
Sbjct: 448 YLNINFCRRVQKRGLLCLLSCLTSLDHLEVLGIRAY 483


>Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical
           protein B0564.6b protein.
          Length = 423

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 316 YLSNNFCPRLRPRGIVFFLLPL*ADEHTAYLMLSGY 209
           YL+ NFC R++ RG++  L  L + +H   L +  Y
Sbjct: 346 YLNINFCRRVQKRGLLCLLSCLTSLDHLEVLGIRAY 381


>Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.6a protein.
          Length = 525

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 316 YLSNNFCPRLRPRGIVFFLLPL*ADEHTAYLMLSGY 209
           YL+ NFC R++ RG++  L  L + +H   L +  Y
Sbjct: 448 YLNINFCRRVQKRGLLCLLSCLTSLDHLEVLGIRAY 483


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,947,237
Number of Sequences: 27780
Number of extensions: 264901
Number of successful extensions: 510
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)