Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0756
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    26   0.24 
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    25   0.75 
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       24   0.98 
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              22   5.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   6.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.2  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 18/46 (39%), Positives = 20/46 (43%)
 Frame = +3

Query: 69   KHSIIQKSFQFVRK*SRGYNLALCPSNNSGRQWFGSALGIAEVHGR 206
            KH IIQ   +   K    Y L+L   N      FG  L  AEVH R
Sbjct: 1086 KH-IIQTHGEMTDKQVEAYMLSLRDENRYHEDIFGITLRTAEVHNR 1130


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 287 KSRAKVI**IIFLFFYCWNP 346
           KS  K++  ++ LFF CW P
Sbjct: 266 KSVIKMLSAVVILFFICWAP 285


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +2

Query: 272 YSTRTKSRA-KVI**IIFLFFYCWNP 346
           + TR K R  K+   II +FF CW P
Sbjct: 250 FLTRAKIRTLKMTVIIIAVFFICWTP 275


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -3

Query: 248 GRRAYGLPDVEWLPSPMDFSNAKGRAKPLPTAVV 147
           GR     PD++ +  P      K   KPLPT  V
Sbjct: 8   GRDFEYCPDLDNVTMPETTPRRKKNKKPLPTECV 41


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 530 FLYINIFK*SQSRKRLQR 583
           FLY NIFK  ++R R  R
Sbjct: 361 FLYYNIFKALRNRARKAR 378


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 248 LQGQ*KKNYSTRTKSRAKVI**IIFLFFYCWNP 346
           + G+ K+  S +T +R  ++  ++  FF CW P
Sbjct: 245 VHGETKQVQSRKTITR--MLSAVVITFFICWAP 275


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 13/68 (19%), Positives = 27/68 (39%)
 Frame = -1

Query: 367  ECPEHPLRIPAIKKKEYYLSNNFCPRLRPRGIVFFLLPL*ADEHTAYLMLSGYRRPWTSA 188
            + PE P+ I A+      +  ++ P  +P G++         ++T Y        P +  
Sbjct: 1178 DAPEAPIAIKALVMSSESILVSWRPPSQPNGVI--------TQYTVYTKADNAEEPTSQK 1229

Query: 187  MPRAEPNH 164
            +P  +  H
Sbjct: 1230 VPPNQLTH 1237


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,792
Number of Sequences: 438
Number of extensions: 3355
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)