Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0754
         (569 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   5.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.6  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   7.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.8  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 205 LCYSKYSVDFFRRIMEGSGKENRLCVKS 288
           LC ++ + ++FR   EG  ++   C KS
Sbjct: 33  LCENRPADEYFRLTTEGDCRDVVRCTKS 60


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 14  GLQEFGTRERTS 49
           G+Q FGT +RTS
Sbjct: 155 GIQVFGTMQRTS 166


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 383 NKKGRKNCKHYKITKIILFKADK 451
           NKK R  CK  ++ K +L    K
Sbjct: 51  NKKNRTACKACRLRKCLLVGMSK 73


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -3

Query: 30   PNSCSPGIH 4
            P +C+PG+H
Sbjct: 1231 PQNCAPGLH 1239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,359
Number of Sequences: 336
Number of extensions: 2323
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)