Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0753
         (549 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I3G5 Cluster: Putative uncharacterized protein PFE151...    37   0.35 
UniRef50_A0C355 Cluster: Chromosome undetermined scaffold_146, w...    35   1.4  
UniRef50_A2F4I8 Cluster: Beige/BEACH domain containing protein; ...    33   3.3  

>UniRef50_Q8I3G5 Cluster: Putative uncharacterized protein PFE1515w;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            PFE1515w - Plasmodium falciparum (isolate 3D7)
          Length = 1419

 Score = 36.7 bits (81), Expect = 0.35
 Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
 Frame = -3

Query: 400  LHMNKTRLNNTQSNKISLPSGVLLGSSRSIR*NYRFKFGINYMNFRSRFCACFLRI---- 233
            ++MN T +NN  +N I   + +     + I  NY  K  +N +NF + F  C L I    
Sbjct: 1192 INMNNTWINNNNNNNIKKKNNI--NKKKKIIINYPLKLLLNNLNFSNIFYICLLLIIPTF 1249

Query: 232  RM*FLSW-VRDA*ILLNTYIFLSII 161
               FL++ +++  + L++Y +L+I+
Sbjct: 1250 ERIFLNYKIKNITLDLHSYCYLNIV 1274


>UniRef50_A0C355 Cluster: Chromosome undetermined scaffold_146, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_146, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 1705

 Score = 34.7 bits (76), Expect = 1.4
 Identities = 15/39 (38%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
 Frame = -2

Query: 257  FLCVFFKNSYVIFVLGSRRLNPTEYLHF-FINYYNDFLN 144
            F+ ++F  SY+I++  S++L+PT+ L   +I++Y DF N
Sbjct: 1409 FIILYFLGSYLIYIDQSQKLSPTQELAMDYISFYIDFEN 1447


>UniRef50_A2F4I8 Cluster: Beige/BEACH domain containing protein; n=1;
            Trichomonas vaginalis G3|Rep: Beige/BEACH domain
            containing protein - Trichomonas vaginalis G3
          Length = 2608

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = -3

Query: 433  IIITQVQMTATLHMNKTRLNNTQSNKISLPSGVLL 329
            IIIT  +   TL++NKTRL   Q+ K++  S VLL
Sbjct: 954  IIITYNEGNFTLYINKTRLQTIQTMKLNFDSSVLL 988


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,585,982
Number of Sequences: 1657284
Number of extensions: 8863083
Number of successful extensions: 18772
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18751
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)