Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0753
         (549 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    25   0.58 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.3  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   2.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.1  

>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 96  NTKFQFDNNKISFNYVSCSN 37
           NT F F +  I F  + CSN
Sbjct: 45  NTDFSFGSKTIDFRKIQCSN 64


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -2

Query: 92  QNFNSIIIKSVSIMYHVQISVHPIL 18
           +N+ +I+  S  IM+H+  +V+PIL
Sbjct: 329 ENYYNILYFS-RIMFHINSAVNPIL 352


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 232 EFLKNTHRNEI*NSYNLF 285
           EFL NTH+ +I N+   F
Sbjct: 349 EFLTNTHKRKIENTSTTF 366


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 455 NRHKKSYDYNYSS 417
           N H K YDY+ SS
Sbjct: 202 NPHAKLYDYDLSS 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,927
Number of Sequences: 336
Number of extensions: 2594
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)