Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0753
         (549 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1086|AAF58800.1|  176|Drosophila melanogaster CG12897-P...    30   1.8  
BT021951-1|AAX51656.1| 1732|Drosophila melanogaster LD01527p pro...    30   2.4  
AE014134-2995|AAF53722.3| 1732|Drosophila melanogaster CG18397-P...    30   2.4  

>AE013599-1086|AAF58800.1|  176|Drosophila melanogaster CG12897-PA
           protein.
          Length = 176

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -3

Query: 439 RMIIITQVQMTATLHMNKTRLNNTQSNKISLPSGVLLGSSRSIR*NYRFK 290
           R+  IT    + T+H N    +N+ SN  ++ S      SR I+  YRF+
Sbjct: 112 RVPTITTTNNSTTIHSNSNSNSNSNSNSSNINSNNNSNMSRLIQPRYRFR 161


>BT021951-1|AAX51656.1| 1732|Drosophila melanogaster LD01527p protein.
          Length = 1732

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +3

Query: 168  DKKM*VFSRI*ASRTQDKNYIR--ILKKHAQKRDLKFI*FIPNLKR*FYRMDLLLPNRTP 341
            DK+  +  R+  +    + Y++  I K H +++ LK I FI N++    R+DLL  ++  
Sbjct: 1055 DKRQKMQGRLQRAAENREQYLKQIIEKAHDEEKKLKEINFIKNIEAQNKRLDLLESSKET 1114

Query: 342  LGRL 353
             GRL
Sbjct: 1115 EGRL 1118


>AE014134-2995|AAF53722.3| 1732|Drosophila melanogaster CG18397-PA
            protein.
          Length = 1732

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +3

Query: 168  DKKM*VFSRI*ASRTQDKNYIR--ILKKHAQKRDLKFI*FIPNLKR*FYRMDLLLPNRTP 341
            DK+  +  R+  +    + Y++  I K H +++ LK I FI N++    R+DLL  ++  
Sbjct: 1055 DKRQKMQGRLQRAAENREQYLKQIIEKAHDEEKKLKEINFIKNIEAQNKRLDLLESSKET 1114

Query: 342  LGRL 353
             GRL
Sbjct: 1115 EGRL 1118


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,468,695
Number of Sequences: 53049
Number of extensions: 394636
Number of successful extensions: 810
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)