Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0753
         (549 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g46450.1 68418.m05721 disease resistance protein (TIR-NBS-LRR...    29   1.5  
At1g26530.1 68414.m03233 expressed protein  contains Pfam profil...    28   3.6  
At5g56080.1 68418.m06997 nicotianamine synthase, putative simila...    27   8.3  

>At5g46450.1 68418.m05721 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1123

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +1

Query: 325 FPIELHLEDLFYLTVY 372
           FP ELHLE+L+YL +Y
Sbjct: 734 FPTELHLENLYYLGLY 749


>At1g26530.1 68414.m03233 expressed protein  contains Pfam profile:
           PF04900 protein of unknown function, DUF652; expression
           supported by MPSS
          Length = 189

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -3

Query: 400 LHMNKTRLNNTQSNKISLPSGVLLGSSRSIR*NYRFKFGINYMNF 266
           L+ NK  L     N  S+PSG+    + S+   YR     N++NF
Sbjct: 30  LNPNKKDLTELPRNVPSVPSGLFFSHNSSLVPPYRVLVDTNFINF 74


>At5g56080.1 68418.m06997 nicotianamine synthase, putative similar
           to nicotianamine synthase [Lycopersicon
           esculentum][GI:4753801], nicotianamine synthase 2
           [Hordeum vulgare][GI:4894912]
          Length = 320

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 218 VLGSRRLNPTEYLHFFINYYNDFL 147
           +LGS   NP  +LH F  YYN++L
Sbjct: 84  ILGSFEDNPLNHLHIF-PYYNNYL 106


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,561,660
Number of Sequences: 28952
Number of extensions: 191191
Number of successful extensions: 369
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)